KEGG   Streptococcus pneumoniae INV104 (serotype 1): INV104_05110
Entry
INV104_05110      CDS       T02072                                 
Name
(GenBank) metallo-beta-lactamase superfamily protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sni  Streptococcus pneumoniae INV104 (serotype 1)
Pathway
sni03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sni00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    INV104_05110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sni03019]
    INV104_05110
Messenger RNA biogenesis [BR:sni03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     INV104_05110
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B Lactamase_B_2 GPW_gp25 SUFBD
Other DBs
NCBI-ProteinID: CBW36194
Position
570639..572300
AA seq 553 aa
MSNISLTTLGGVRENGKNMYIAEIGESIFVLNVGLKYPENEQLGVDVVIPNMDYLFENSD
RIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFNDFHVIDE
NTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATDFARLAE
IGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSRIQQIFD
AADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIILETGRMG
EPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVKLITQSL
HVSGHGNVRDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPEHIFIPKKGTTMA
YENGDFVPAGSVSAGDILIDGNAIGDVGNVVLRDRKILSEDGIFIVAITVNRREKKIVAR
ARVHTRGFVYLKKSRDILRESSELINQTVEDYLQGDDFDWADLKGKVRDNLTKYLFDQTK
RRPAILPVVMEAK
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgagtaatatcagtttaacaacacttggtggtgtgcgtgagaatggaaaaaatatgtac
attgctgaaattggagagtccatttttgttttgaatgtagggttaaaatatcctgaaaat
gaacaattaggggtcgatgtggtgattccaaacatggattacctttttgaaaatagcgac
cgtattgctggggttttcttgacccacgggcatgcggatgccattggtgctctaccttat
ctcttggcagaggctaaagttcctgtatttgggtctgagttgaccattgagttggcaaag
ctctttgtcaaaggaaatgatgccgttaagaaatttaatgatttccatgtcattgatgag
aatacggagattgattttggtgggacagtggtttccttcttccctacgacttactccgtt
ccagagagtctgggaattgtcttgaagacatcggaaggaagcatcgtttatacaggtgac
ttcaaatttgaccaaacggctagtgaatcttatgcaactgattttgctcgtttggcagag
attggtcgtgacggcgtcctggctctcctcagtgattcggccaatgcagacagcaatatt
caggtggctagtgaaagtgaagttagggatgaaattacccaaactattgctgactgggaa
ggtcgtatcatcgttgcagctgtttccagtaatctttctcgtattcagcagatttttgac
gctgcggataaaacaggtcgacgtatcgtcttgacaggatttgatattgaaaatatcgtc
cgcacagcgattcgtcttaagaagttgtctttagccaacgaaattctcttgattaagcct
aaagatatgtctcgctttgaagaccatgagttgattattcttgagacaggtcgtatgggt
gaacctatcaatggacttcgtaagatgtcgattggtcgccatcgttatgtagaaatcaag
gatggggacctggtctatattgctacggctccgtctattgctaaagaagcctttgttgcg
cgtgtggaaaatatgatttatcaggcaggtggggttgtcaaattgattacccaaagttta
catgtatcagggcacggaaatgtgcgtgatttgcagctgatgatcaatcttttgcaacct
aagtacctcttccctgtccaaggggagtatcgtgagttggatgctcacgctaaggctgcc
atggcagttgggatgttgccagaacacatcttcattcctaaaaaggggacgaccatggct
tacgagaatggagactttgttccagctggatcggtttcagcaggagatatcttgattgat
gggaatgccattggtgatgttggaaatgttgttcttcgtgaccgtaagatcttgtcagag
gatggaattttcatcgtggctattacagtcaaccgtcgtgagaagaaaattgtggctagg
gctcgtgttcatacgcgcggatttgtttatctcaagaagagtcgcgatattctccgtgaa
agttcagaattgattaaccaaacggtagaagattatcttcaaggagatgactttgactgg
gcagatcttaaagggaaggttcgagataatttgaccaagtatctctttgaccaaaccaag
cgtcgtccagctattttaccagtagtcatggaagcaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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