KEGG   Sphingomonas sp. NIC1: A7E77_10325
Entry
A7E77_10325       CDS       T04479                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
snj  Sphingomonas sp. NIC1
Pathway
snj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:snj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A7E77_10325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snj03019]
    A7E77_10325
   03016 Transfer RNA biogenesis [BR:snj03016]
    A7E77_10325
Enzymes [BR:snj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     A7E77_10325
Messenger RNA biogenesis [BR:snj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     A7E77_10325
Transfer RNA biogenesis [BR:snj03016]
 Prokaryotic type
  tRNA degradation factors
   A7E77_10325
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 S1_2
Other DBs
NCBI-ProteinID: ANC87259
Position
complement(2167905..2170256)
AA seq 783 aa
MFNAKKVSIEWGGQTLTLETGKVARQADGAVIATLGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKFSASGRIPGGFFKRERGATERETLVSRLIDRPIRPLFPEGFYNEINCIAQVLSY
DGENEPDLLAMIAASAAMTLSGVPFMGPIGAARVGYKDGEYVLNPSDADVLTGELDLMVA
ATHDAVMMVESEAKELSEDVMLGAVMFAHKASQQVIDAIIDLAEQAAKEPWELKVQADSA
AVKAKLKKLIGKDLEAAYKLTDKQARQTAINDARAKARDGMADLKDSDPQAYLASLKLVK
KLEADIVRTAILKTGRRIDGRNTTTVRPIESEVHFLPRAHGSALFTRGETQTIATTTLGT
RDAEQMIDGLNGLSYQNFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPSK
EEFPYTIRVTSDITESNGSSSMATVCGGSLSMMDAGVPLKRPVSGIAMGLILEGKDFAVL
SDILGDEDHLGDMDFKVAGTSEGITALQMDIKISGITEEIMKVALKQAHEGRAHILNEMA
KALGETRSELSAHAPRIETFTIDKSKIREVIGTGGKVIREIVATTGAKVDIDDEGVIKVS
SSDSSQIEAAIKWIKGLVEEAEVGKIYDGKVVNLVDFGAFVNFMGGKDGLVHVSEIKNER
VEKVSDVLSEGQQVKVKVLEIDPRGKVRLSMRVVDQETGAELEDTRPAREPREGGDRGSR
GPRGDRGPRRDGGDRGGDRGDRGPRRDRGPRGEGGDRGPRNGGGNDDGPAPEFAPAFLTG
DRD
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgttcaatgccaagaaggtatcgatcgagtggggcggccagacgctcaccctcgaaacg
ggcaaggtcgcccgccaggccgacggcgcggtgatcgcgacgctcggcgagacggtggtg
ctctgcgccgtgaccgccgccaagtcggtgaaggaagggcaggatttcttcccgctcacc
gtccactaccaggaaaagttttcggcttcgggccgcatccccggtggcttcttcaagcgc
gagcgtggcgcgaccgagcgtgagacgctggtcagccgcctgatcgaccgtccgatccgc
ccgctgttccccgaaggcttctacaacgagatcaactgcatcgcgcaggttctgtcgtat
gacggcgagaacgagcccgatctgctggcgatgatcgccgcctcggccgcgatgacgctg
tcgggcgtgcccttcatgggcccgatcggcgcggcgcgcgtcggctacaaggacggcgaa
tacgtcctcaacccgtcggacgccgacgtgctgaccggcgagctcgacctgatggtcgcc
gcgacgcatgacgcggtcatgatggtcgaatccgaagccaaggagctgtcggaagacgtc
atgctcggcgccgtgatgttcgcgcacaaggcgtcgcagcaggtgatcgacgcgatcatc
gacctcgccgaacaggccgccaaggagccttgggaactcaaggtccaggccgacagcgca
gccgtgaaggccaagctcaagaagctgatcggcaaggacctggaggcggcctacaagctg
accgacaagcaggctcgccagaccgcgatcaacgacgcgcgcgccaaggcccgcgacggc
atggccgacctgaaggacagcgatccgcaggcctatctcgccagcctgaagctggtgaag
aagctggaggcggatatcgtccgcaccgcgatcctgaagaccggccgccgcatcgacggc
cgcaacaccacgaccgtccgtccgatcgaatcggaagtccacttcctgccgcgtgcgcac
ggttcggcgctgttcacgcgtggcgaaacgcagacgatcgcgaccaccacgctcggcacc
cgcgacgcggagcagatgatcgacggcctcaacggcctgtcgtaccagaacttcatgctc
cactataacttcccgccctattcggtcggtgaagtcggccgcttcggtgcgccgggtcgt
cgcgaagtcggccacggcaagctcgcctggcgcgcgctgcacccggtgctgccgtcgaag
gaggagttcccctatacgatccgcgtcacgtcggacatcaccgagtcgaacggctcgtcg
tcgatggccaccgtctgcggcggttcgctgtcgatgatggacgcgggcgtgccgctgaag
cgccccgtctcgggcatcgcgatgggcctgatcctggaaggcaaggacttcgccgtcctg
tcggacatcctgggcgacgaggatcatcttggcgacatggactttaaggtcgccggcacc
agcgagggcatcaccgcgctgcagatggacatcaagatctcaggcatcaccgaagagatc
atgaaggtcgcgctgaagcaggcgcatgaaggccgcgcgcacatcctcaatgagatggcc
aaggcgctgggcgagacccgttcggagctgtcggcgcacgcgccgcgcatcgaaaccttc
acgatcgacaagtcgaagatccgcgaagtgatcggcacgggcggcaaggtgatccgcgag
atcgtcgccaccaccggcgccaaggtcgacatcgacgacgagggcgtcatcaaggtgtcg
tcgtcggattcgtcgcagatcgaagccgcgatcaagtggatcaagggcttggtcgaagag
gccgaggtcggcaagatctacgacggcaaggtcgtcaacctggtcgatttcggcgcgttc
gtgaacttcatgggcggcaaggacggtctcgttcacgtctcggagatcaagaacgagcgc
gtcgagaaggtctcggacgtcctcagcgaaggccagcaggtcaaggtgaaggtcctcgag
atcgatccgcgcggcaaggttcgcctgtcgatgcgcgtcgtcgatcaggaaaccggcgcc
gagttggaagacacgcgtccggcgcgcgaaccgcgtgaaggcggcgaccgtggcagccgt
ggcccgcgcggcgaccgtggtccccgtcgtgacggcggcgatcgtggcggcgaccgcggt
gaccgcggcccgcgccgtgaccgtggcccccgcggcgaaggcggtgaccgtggcccgcgt
aacggcggcggcaacgatgacggccctgcgcccgaattcgcgccggccttcctgaccggt
gatcgcgactga

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