KEGG   Streptococcus pneumoniae 70585 (serotype 5): SP70585_1326
Entry
SP70585_1326      CDS       T00872                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
snm  Streptococcus pneumoniae 70585 (serotype 5)
Brite
KEGG Orthology (KO) [BR:snm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:snm03032]
    SP70585_1326 (topA)
   03400 DNA repair and recombination proteins [BR:snm03400]
    SP70585_1326 (topA)
Enzymes [BR:snm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SP70585_1326 (topA)
DNA replication proteins [BR:snm03032]
 Prokaryotic type
  DNA Topoisomerases
   SP70585_1326 (topA)
DNA repair and recombination proteins [BR:snm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SP70585_1326 (topA)
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim RNA_POL_M_15KD DUF2996 Auto_anti-p27
Other DBs
NCBI-ProteinID: ACO16687
UniProt: C1C7P1
Position
complement(1228631..1230718)
AA seq 695 aa
MATATKKKKSTVKKNLVIVESPAKAKTIEKYLGRNYKVLASVGHIRDLKKSSMSVDIENN
YEPQYINIRGKGPLINDLKKEAKKANKVFLASDPDREGEAISWHLAHILNLDENDANRVV
FNEITKDAVKNAFKEPRKIDMDLVDAQQARRILDRLVGYSISPILWKKVKKGLSAGRVQS
IALKLIIDRENEINAFQPEEYWTVDAVFKKGTKQFHASFYGVDGKKMKLTSNDEVKEVLS
RLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVAQQLYEGINIGS
GVQGLITYMRTDSTRISPVAQNEAASFITDRFGSKYSKHGSKVKNASGAQDAHEAIRPSS
VFNTPESIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTMAVKLSQKGVQFAANGSQVKF
DGYLAIYNDSDKNKMLPDMVVGNVVKQVNSKPEQHFTQPPARYSEATLIKTLEENGVGRP
STYAPTIETIQKRYYVRLAAKRFEPTELGEIVNKLIVEYFPDIVNVTFTAEMEGKLDDVE
VGKEQWRRVIDAFYKPFSKEVAKAEEEMEKIQIKDEPAGFDCEVCGSPMVIKLGRFGKFY
ACSNFPDCRHTQAIVKEIGVECPSCHQGQIIERKTKRNRLFYGCNRYPECEFTSWDKPVG
RDCPKCGNFLMEKKVRGGGKQVVCSKGDYEEEKIK
NT seq 2088 nt   +upstreamnt  +downstreamnt
gtggctacggcaacaaaaaagaaaaaatcaacagttaaaaaaaatctagtcatcgtggag
tcgcctgctaaggccaagacgattgaaaaatatctaggcagaaactacaaggttttagcc
agtgttgggcatatccgtgatttgaagaaatccagtatgtccgtcgatattgaaaataat
tatgaaccgcaatatattaatatccgaggaaaaggccctcttatcaatgacttgaaaaaa
gaagctaaaaaagctaataaagtttttctcgcgagtgacccggaccgtgaaggagaagcg
atttcttggcatttggcccatattctcaacttggatgaaaatgatgccaaccgtgtggtc
ttcaatgaaatcaccaaggatgcagtcaaaaatgcttttaaagaacctcgtaagatcgat
atggacttggtcgatgcccaacaagctcgtcggatcttggaccgcttggtagggtattcg
atttcgcctattttgtggaagaaggtcaagaagggcttgtcagcaggtcgcgttcagtcc
attgcccttaaactcatcattgaccgtgaaaatgaaatcaatgccttccagccagaagaa
tactggacagttgatgctgtctttaaaaagggaaccaaacaatttcatgcttccttctat
ggagtagatggtaaaaagatgaaactgaccagcaatgacgaagtcaaggaagtcttgtct
cgtctgacgagtaaagacttttcagtagatcaggtggataagaaagagcgcaagcgcaat
gctcctttaccctataccacttcatctatgcagatggatgctgccaataaaatcaatttc
cgtactcgaaaaaccatgatggttgcccaacagctctatgaaggaattaatatcggttct
ggtgttcaaggtttgattacctatatgcgtaccgattcgactcgtatcagtcctgtagcg
caaaatgaggcggcaagcttcattacggatcgttttggtagtaagtattctaagcacggt
agcaaggtcaaaaacgcatcaggtgctcaggatgcccatgaggctattcgtccgtcaagt
gtctttaatacaccagaaagcatcgctaagtatctggacaaggatcagctcaagctatat
acccttatctggaatcgttttgtggctagccagatgacagcggccgtttttgataccatg
gctgttaaattgtctcaaaaaggggttcaatttgctgccaatggtagtcaggttaagttt
gatggttatcttgccatttataatgattctgacaagaataagatgttaccggacatggtt
gttggaaatgtggtcaaacaggtcaatagcaaaccagagcaacatttcacccaaccgcct
gcccgttattctgaagcaacactgattaaaaccttggaggaaaatggggttggacgtcca
tcaacctacgcgccaaccattgaaaccattcagaaacgttattatgttcgcctggcagcc
aaacgttttgaaccgacagagttgggagaaattgtcaataagctcatcgttgaatatttc
ccagatatcgtaaacgtgaccttcacagctgaaatggaaggtaaactggatgatgtcgaa
gttggaaaagagcagtggcgacgggtcattgatgccttttacaaaccattctctaaagaa
gttgccaaggctgaagaagaaatggaaaaaatccagattaaggatgaaccagctggattt
gactgtgaagtgtgtggcagtccaatggtcattaaacttggtcgttttggtaaattctac
gcttgtagcaatttcccagattgccgtcatacccaagcaatcgtgaaagagattggtgtt
gagtgtccaagctgtcatcagggacaaattattgagcgaaaaaccaagcgtaatcgccta
ttctatggttgcaatcgctatccagaatgtgaatttacctcttgggacaagcctgttggt
cgtgactgtccaaaatgtggcaacttcctcatggagaaaaaagtccgtggtggtggcaag
caggttgtttgtagcaaaggcgactacgaggaagaaaagattaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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