KEGG   Ancylobacter novellus: Snov_0348
Entry
Snov_0348         CDS       T01258                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
sno  Ancylobacter novellus
Brite
KEGG Orthology (KO) [BR:sno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sno03016]
    Snov_0348
Enzymes [BR:sno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Snov_0348
Transfer RNA biogenesis [BR:sno03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Snov_0348
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: ADH87681
UniProt: D7A265
Position
345640..346272
AA seq 210 aa
MSIRLHRGDLVDLSRYTPENAPFVAIDTETLGLNPHRDRLCVVQLSPGDGTADVVQIPAG
AGPGSAPNLEALLTDPRITKLFHFARFDVAVLGKTFGLTVAPVWCTKIASRLTRTYTDRH
GLKELVRELIGVDLSKQQQSSDWAAEELSEAQLQYAASDVLYLHALREKLASMLARDGRT
ELAQSCFEFLPTRAKLDLAGWPDEDIFAHS
NT seq 633 nt   +upstreamnt  +downstreamnt
atgagcatccgcctgcaccgcggcgacctggtcgacctctcccgctacacgcccgagaac
gcccccttcgtcgccatcgacaccgagacgctgggtctcaacccgcatcgcgaccgcctg
tgcgtggtgcaactctcgcccggcgacggtaccgccgacgtggtgcagatcccggccggc
gccggcccgggaagcgcgccgaacctggaggcgctgctcaccgatccgcgcatcaccaag
ctcttccacttcgcccgcttcgacgtcgccgtgctcggcaagacctttggcctgaccgtc
gcgccggtgtggtgcaccaagatcgcctcgcgcctcacccgcacctataccgaccggcac
gggctgaaggagctggtgcgcgaattgatcggcgtcgacctgtcgaagcagcagcagagc
tcggactgggcggcggaggagctgagcgaggcgcagcttcaatatgccgcctccgacgtg
ctctacctgcacgcactgcgcgagaagctcgcttccatgctggcgcgcgacgggcgcacc
gagctggcgcagtcctgcttcgagttcctgccgacccgcgccaagctggacctcgccggc
tggccggacgaggacatcttcgcgcattcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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