KEGG T01258: Snov

Starkeya novella: Snov_3925

Entry

Snov_3925 CDS T01258

Definition

tryptophan synthase subunit beta

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

sno Starkeya novella

Pathway

sno00260	Glycine, serine and threonine metabolism
sno00400	Phenylalanine, tyrosine and tryptophan biosynthesis
sno01100	Metabolic pathways
sno01110	Biosynthesis of secondary metabolites
sno01230	Biosynthesis of amino acids

Module

sno_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:sno00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sno00400]

SSDB

Motif

Pfam:

PALP

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(4162528..4163760)

AA seq 410 aa
MNVPNSFRTGPDESGHFGIFGGRFVAETLMPLILDLEKAYNEAKADPAYKAEMDAGLKHY
VGRPSPLYYAERLTEHLRAKSEPGKGAKIYFKREELNHTGSHKVNNVLGQILLARRMGKK
RIIAETGAGQHGVATATLCARYGLECVVYMGAVDVSRQAPNVFRMKMLGATVVPVQSGSK
TLKDAMNEALRDWVTNVDSTFYCIGTVAGPHPYPGMVRDFQSVIGNETREQMLEAEGRLP
DSLIACIGGGSNAMGLFHPFLDDPSVKIFGVEAAGHGIPTGEHAASLTGGRPGVLHGNRT
YLLMDDDGQIAEAHSISAGLDYPGIGPEHSWLHDIGRATYISATDEEALAAFQLVAKLEG
IIPALEPAHALAKVADLAPTFPQDHLMVVNLSGRGDKDIPQVADILGTRL

NT seq 1233 nt +upstreamnt +downstreamnt
gtgaacgttcccaattccttccgtaccggccccgatgagagcgggcatttcggcatattc
ggcggtcgtttcgttgccgaaacactcatgccgctcatcctcgacctagagaaggcctat
aacgaggccaaggccgacccggcctacaaggcggagatggatgccgggctgaagcactat
gtcggccggccgagcccgctctattacgccgagcgcctgaccgagcacctgcgtgcgaag
tccgagcccggcaagggcgcgaagatctatttcaagcgcgaggagctgaaccacaccggc
tcgcacaaggtgaacaacgtcctcggccagatcctgctcgcccgccgcatgggcaagaag
cggatcatcgccgagaccggcgccggccagcacggcgtcgccaccgccacgctctgcgcg
cgctacggcctcgaatgcgtcgtctatatgggcgcggtcgacgtctcgcgtcaggcgccc
aacgtcttccgcatgaagatgctcggcgccaccgtggtccccgtgcagtccggttcgaag
acgctcaaggacgcaatgaacgaggcgctgcgcgactgggtgaccaatgtcgacagcacc
ttctactgcatcggcaccgtcgccggcccgcacccttatccaggaatggtccgggatttc
caaagcgtcatcggcaacgagacccgcgagcagatgctggaggccgagggccggctgccg
gacagcctcattgcctgcatcggcggcggctccaacgccatgggcctgttccatcccttc
ctcgacgatcccagcgtgaagatcttcggcgtcgaggctgccggccacggcatcccgacg
ggcgagcatgccgcctcgctcaccggcggccggccgggcgtcctgcacggcaaccgtacc
tatctgctgatggacgatgacgggcagatcgccgaggcgcactccatctccgccggcctc
gactatcccggcatcggcccggagcattcgtggctgcacgatatcggccgcgccacctac
atctcggcgaccgacgaggaggcgctcgccgccttccagctcgtcgccaagctcgagggc
atcatcccggcgctggagccggcccatgccctcgccaaggtggccgatctcgccccgacc
ttcccgcaggaccatctgatggtcgtcaatctctccggccgcggcgacaaggacatcccg
caggtggcggacattctggggacccgcctatga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SNO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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