KEGG   Solenopsis invicta (red fire ant): 105204874
Entry
105204874         CDS       T03916                                 
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
  KO
K12856  pre-mRNA-processing factor 8
Organism
soc  Solenopsis invicta (red fire ant)
Pathway
soc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105204874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soc03041]
    105204874
Spliceosome [BR:soc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    105204874
 Complex C
   U5 SnRNP specific factors
    105204874
SSDB
Motif
Pfam: PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg PROCT RRM_4 JAB
Other DBs
NCBI-GeneID: 105204874
NCBI-ProteinID: XP_011172427
Position
16:complement(6834018..6843269)
AA seq 2371 aa
MSIPPYLLSPNPWATMMAQQQAQIAAQVHAQAAAHAQAAHHAHMQAIAGPPLPQIPKQPE
VLSEDKLQEKAQKWQQLQSKRFAEKRKFGFVDAQKEDMPAEHIRKIIRDHGDMSSRKYRH
DKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVYIAQ
WGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIELDSEEDESV
ASWFYEHKPLVGTKHVNGSTYRRWNLTLPQMATLYRLANQLLTDLVDQNFFYLFDPKSFF
TAKALNMAIPGGPKFEPLVKDSNAADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNMP
HFVHLSWYHAPNVVYIKTEDPDLPAFYFDPLINPISHRNSLKTMEPQIEDDEDFVLPGDV
QPFLQEIPLYTDNTANGIALLWAPRPFNTRSGRTRRAIDIPLVKSWYREHCPPGQPVKVR
VSYQKLLKYFVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTIDWVEAGLQVCRQGYNML
NLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHVQY
RLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKG
PGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLE
LRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVK
MKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPE
EAVAIFTTSVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREEL
GLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYLDQ
YLWYEADKRRLFPPWVKPADTEPPPLLVYKWCQGINNLQDVWDVSEGECNVLLESKFEKL
YEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIAQYY
GLVLDLLVLGLQRASEMAGPPQMPNDFLTFQDVASETAHPIRLYCRYVDRIHLFLRFSAD
EARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRS
TTTIQWENSFVSVYSKDNPNLLFNMSGFECRILPKCRTTHEEFTHRDGVWNLQNEITKER
TAQCFLRVDDESLQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQEL
LDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSK
QTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNRRLT
LEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKL
WNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRS
GLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQK
VHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSRPSL
LADSKDVMDNTTTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIA
IDLAYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLS
SQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHT
SVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVI
KGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALH
VNTERTKVVLKPDKTTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGKKNNVNVASLTQ
SEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITATTSNYET
QTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQI
AGYLYGISPPDNPQVKEIRCIVMAPQWGTHQTVHLPNTLPNHQYLKEMEPLGWIHTQPNE
LPQLSPQDISTHARIMAENSIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQNTDK
GNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANPKEF
YHEVHRPAHFLNFSSLEDGDGVGADREDMFA
NT seq 7116 nt   +upstreamnt  +downstreamnt
atgtctattccaccatatttgctgagcccaaatccatgggccacgatgatggcccagcaa
caagctcagatagcggcccaggtgcatgctcaggctgcggctcatgcgcaagcagctcat
catgctcatatgcaggctatagctggaccgccgttgcctcaaatacctaaacagccagag
gtcttgtccgaggataaacttcaggaaaaagcgcaaaaatggcagcagttgcaatcgaag
cgatttgcggagaagagaaaatttggctttgtagatgctcagaaggaagatatgccagct
gagcatataagaaagatcatcagagatcatggtgatatgagcagtagaaaatacagacat
gataagcgtgtttacttaggtgcattaaagtacatgccacatgctgttatgaaactattg
gaaaatatgcccatgccctgggaacaaataagagatgttaaagtcttgtatcatattact
ggggctattacatttgtcaatgagattccttgggtcatagaacctgtatacatagctcaa
tggggtactatgtggattatgatgagacgagaaaaaagagatcgtaggcatttcaagaga
atgcgattcccaccttttgatgatgaagagcctcctctcgattatgcagataacgttcta
gatgttgaaccattagaagctatacaaattgaacttgattcagaagaagatgagtctgtg
gcatcatggttttatgaacataaacctttagttgggacaaaacacgttaatggatctaca
taccgaaggtggaatctgacgctaccgcaaatggccactctgtatcgtttggctaatcaa
ttgttaaccgacttggtagatcaaaatttcttctatctttttgatccaaaatcattcttc
accgcaaaagccctaaatatggctattcctggaggaccgaaattcgaaccgttagtaaaa
gattcaaacgcggcggatgaagattggaacgaatttaacgacataaataagattatcatt
cggcagcctatcagaacagaatataggattgcatttccttatttatacaataatatgcct
cattttgtacatctttcatggtatcatgcaccaaatgttgtgtacataaaaactgaagat
ccagatttacctgcattctacttcgatccattaattaatccaatttctcatagaaattca
ttaaagacgatggaaccacaaattgaagatgatgaagactttgttttacctggcgacgta
caaccgttccttcaagaaatacctctttatactgataacacagctaatgggatagcactc
ctatgggcgccaaggccgtttaacacacggtccggaagaacgagaagagctatcgatatc
ccattagtcaagtcgtggtacagagagcattgcccacctggacaacctgtaaaagtgcga
gtcagttatcagaaattgctgaaatactttgtgctgaacgctttgaagcacagaccaccg
aaaccacagaagaaacgctatttattccgttcatttaagtctaccaagttcttccagact
acgacgatagactgggtagaagccggtctgcaggtgtgtcgtcaaggatacaacatgttg
aatctgttgattcatcggaaaaatctcaattatcttcatttagattacaattttaatttg
aaacctgtcaaaacgcttacgacaaaagagagaaagaaatcacgctttggtaacgctttc
catctgtgccgtgagattcttcgtttgacgaagcttataatcgattctcacgttcagtat
cgactgaacaacgtggacgcctttcaacttgctgatggattgcaatacatctttgcgcac
gtcggtcagttgaccggcatgtatcgatacaagtacaaattaatgcggcaaattaggatg
tgtaaagatttgaaacatttaatctattaccgtttcaataccggaccggtcggtaaagga
cctggatgtggattctgggcacctggctggcgtgtctggttgttcttcatgagaggtatc
actccgctgttggagagatggttgggtaatctattgtcaagacaatttgaaggtcgccac
tcgaaaggcgtggcaaagacggtgacgaagcaacgagttgaatcgcacttcgatctcgaa
ttacgagcatccgttatgcatgatatagtggacatgatgcctgaaggaataaagcagaac
aaggcacggactattctgcagcatctgagtgaggcctggcgttgttggaaggcgaatatc
ccatggaaggtgccaggtttaccaattccaattgagaacatgatattgcgttatgtcaag
atgaaagctgactggtggactaacacagctcattacaatcgagagagaattcgacgcggc
gccacagtggataaaaccgtgtgcaagaagaatcttggtcgtttgacgcgcctctacttg
aaagctgagcaagaacgacagcacaattatttgaaagacggtccgtacatatcgccggaa
gaagctgtagctatattcactacttcggtgcattggctagagtctcgaagattcgcgccg
atacctttcccacccttatcctacaaacatgacacaaaacttttaatattggctttggaa
cgtttgaaagaagcctatagcgttaaatctaggttaaatcaaagtcaacgagaagaacta
ggtttgatagagcaagcgtacgacaatccacacgaagcattatccagaattaagagacat
ttgctcacacagagagcctttaaggaagttggcatcgaattcatggatctctatagtcat
ttgattcctgtgtacgatgttgagccgctcgaaaagatcacggatgcttatctcgatcaa
tatctgtggtacgaggcagacaagaggcgattgttcccaccatgggtgaaaccggctgac
acagaaccgccaccgcttctcgtctacaagtggtgccagggtattaacaatctccaggat
gtgtgggatgtcagcgaaggcgagtgcaatgtgttactcgaatcaaaattcgagaaactg
tacgagaagatcgatctcacgctactcaacagattgttgcgtctaatagtcgatcataat
atcgccgattacatgactgcaaagaataacgtagtcatcaattacaaagatatgaatcat
accaacagttacggcattatcaggggattgcaatttgcgtcctttatcgcccaatactat
ggactggtattagatttgcttgtgctaggtctccaacgagccagcgagatggccggcccg
ccgcaaatgccgaatgactttttaacattccaggatgtcgcctctgaaacggcgcatcct
attcgtttgtattgtcgctacgtcgatagaatacatttgttcctgcgcttctctgccgac
gaagcgagagatcttatccagcgttatctcactgagcatcctgatccgaacaatgagaac
atcgtcggctacaataataagaagtgttggccgcgagacgctcgtatgagactgatgaag
catgacgtgaacctgggtcgtgctgttttctgggacattaagaatcgactaccacgttcc
accaccactattcaatgggagaatagttttgtcagcgtctatagcaaggacaatcctaat
ctattgttcaatatgagtggttttgaatgcagaattctacccaagtgcagaacaactcac
gaagagtttacacatcgggatggcgtctggaatctccagaacgaaatcacaaaggagaga
acagcgcaatgcttcttgcgtgtcgacgatgaaagtttgcaacgattccataatcgtgtc
agacaaatcttaatggcctcaggctcgactactttcacgaaaattgtgaacaagtggaac
accgcattgatcggtttaatgacatatttcagagaggcggtggtaaacacccaggagtta
ttggatctattagtcaagtgcgagaataagattcagacacgaattaaaatcggactgaat
tccaaaatgccgtcgcggttcccacctgtcgtcttttatacacccaaggaattgggcggt
ctgggaatgctgtcaatgggtcacgtgttaataccgcagtccgacttgagatggtcgaaa
caaaccgatgtgggcatcactcacttccgttcgggtatgagtcacgacgaagatcaactg
attccaaacttgtaccgttacatacagccgtgggaatcagaatttatcgattctcaacgc
gtctgggcagagtacgctctgaagcgacaggaggccaatgcccaaaatcgcaggctcact
ctggaggaccttgaggacagctgggaccgcggtattcctagaataaatacactatttcag
aaggatcggcacacgctggcctatgacaagggttggcgcattcgaacagagtttaaacag
tatcaagtgttgaaacagaatccgttttggtggactcatcagcgtcacgacggcaaatta
tggaatctgaataactaccgaactgatatgattcaagcgctcggcggtgtcgagggcatt
ctggagcatactctcttcaagggcacctatttcccgacgtgggaaggtctcttctgggag
aaggcgtctggtttcgaagagtccatgaaatacaagaaactgacgaacgctcaacgttcc
ggtctcaaccagattcccaatcgtcgattcactctatggtggtcgcctactattaatcgc
gccaacgtttacgtcggtttccaggtgcaacttgatttaacgggcatattcatgcacgga
aaaataccgaccctaaaaatctcgttgatccagatattccgcgctcacttgtggcaaaag
gtacacgagtccattgtgatggatctttgccaggtgttcgatcaagagttggacgcactg
gaaatcgaaaccgtgcagaaggagacgattcatcctcgaaagtcttacaagatgaactcc
tcgtgcgctgacattctactattctccgcctataaatggaatgtgtctcggccatctctt
ctcgctgattccaaagatgtcatggataatacgaccacgcaaaagtattggatcgatgtt
caactgagatggggcgactatgattcccacgacatcgagcggtatgctcgtgcgaaattc
cttgattatactacggacaacatgtctatttacccatcacccactggtctccttattgcc
attgatctggcatacaacttgcatagcgcctatggtaattggttcccaggctgcaaaccg
ctcatacagcaagccatggcgaagatcatgaaagcgaatccagctttgtatgtcttacgt
gaacgcattcgcaaagcgttacagttgtattcgtcggaaccgaccgagccttacctctca
tcacaaaactatggcgagctcttctccaaccaaatcatatggttcgtcgacgacacaaat
gtgtatcgtgtgactatccacaaaacttttgaaggcaatttaacgacgaagccgataaac
ggcgcgatcttcatctttaatccgcgcaccggacaactctttctgaagattattcacacc
tctgtatgggcgggccaaaagcgtctgggtcagctagccaagtggaaaactgctgaagaa
gttgctgcgcttattcgctctctaccagtggaggagcaaccgaagcagattatcgttacc
agaaagggaatgttagatccactggaagtgcacttgctggactttcccaacatagtcata
aagggctcggagttacaattaccattccaggcgtgtctcaaagtggagaaatttggcgat
ttgattttaaaagcgaccgagccgcagatggtattgtttaatctttacgacgactggttg
aagaccatctcatcttataccgcgttctcgcgactgattctgattttgcgcgctctacac
gtcaacaccgagagaaccaaagtcgttctcaaacctgacaagactaccatcaccgaacca
catcacatctggccctcgctgtcggacgatgaatggattaaagtggaagtgcagctgaag
gatctgattttagcggactacggcaagaagaacaacgttaatgtcgcatcgctcacgcaa
tccgagattcgcgatatcattttgggcatggaaataagcgctccgtctgcgcagcgacaa
caaatcgccgagattgaaaagcaaactaaagagcaaagccagttgaccgctaccaccacg
cgaacagtgaacaagcatggtgacgagatcattactgcgactacatccaattacgagaca
cagactttcagctcgaaaactgaatggcgagtgcgtgccatctctgcaaccaatcttcat
ctcagaacgaatcacatctacgtttcgtccgatgatattaaggagaccggctacacttat
atcttacctaagaacgtattgaaaaaattcgtcaccatttccgatctgcgagcacaaata
gctggctatttatacggcatcagtccacctgataatcctcaggtgaaggaaatcagatgc
attgtaatggcacctcagtggggaactcaccagaccgttcatttgccaaatacgctacct
aatcatcaatatttgaaagagatggagccattaggatggatacacacgcagccgaacgag
ctgccacagctctcgccgcaggatatatctactcacgcccgaattatggcggagaattcc
atctgggacggcgaaaagactatcgttatcacttgcagttttacccctggttcctgctct
ctcacagcgtacaagttgactcctagtgggttcgagtggggcaagcagaacacagataaa
ggcaataatccgaagggttatctacccagtcattacgagaaagtacaaatgcttctgtcc
gatcgtttcctcggcttctttatggtgcccagtcaaggctcgtggaactacaactttatg
ggcgtgaggcatgacccaaacatgaagtacgagttacaactggcgaatccaaaggagttc
taccacgaagtgcataggccggctcatttcctcaacttctcaagtttggaagacggtgac
ggcgttggagctgatcgcgaagatatgtttgcgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (588)   
   KEGG ORTHOLOGY (1)   
   RefGene (584)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (606)   

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