KEGG   Spinacia oleracea (spinach): 110778086
Entry
110778086         CDS       T05137                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110778086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:soe03021]
    110778086
   03036 Chromosome and associated proteins [BR:soe03036]
    110778086
Transcription machinery [BR:soe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     110778086
   Coactivators
    SAGA/TFTC/STAGA complex
     110778086
Chromosome and associated proteins [BR:soe03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     110778086
    STAGA complex
     110778086
    TFTC complex
     110778086
    SAGA complex
     110778086
    SLIK complex
     110778086
SSDB
Motif
Pfam: WD40 TFIID_NTD2 NBCH_WD40 ANAPC4_WD40 PALB2_WD40 LisH WD40_like Cytochrom_D1 Nup160
Other DBs
NCBI-GeneID: 110778086
NCBI-ProteinID: XP_021838336
UniProt: A0A9R0HWI0
Position
2:complement(91335184..91353233)
AA seq 677 aa
MEEEEIEKAVLAYLKKKGFRQTEVAFQEEQQLQQQQKHPQQQQSKNSSSNSHTDPDVAKL
ILTFTSESESLPAQYYDGYSKLRSWAHNSLDLYKHELLRVLYPVFIHCFMDLVARGHLQE
ARSFFITFREDHETMHERDLQKLEGVLSPSHLKEMEFAHTLRQSKVNIKICQYSHELLLQ
YLLKIQSMLGVVNEHINFQVCPGQPGIISDDADAVTLVDGGQDAANLINQKEIQWGMLED
SIEDRLEKGGGLLLDSDKVDGENKEGENEENKKRSADGGKQAAPVKKSKKDKVGGAGGKA
ARPEVITPLAPRVKPELTLPAMPTEVEHSILEDLRNRVQLSSVALPSVSFYTFINTHNGL
NCASISHDGSLVAGGFSDSSLKVWDMSKLGQQMDNTALQGENDTAGNEHMHSANGGKIPY
TLFQGHSGPVYSASFSPLGDFILSSSADSTVRLWSTKLNANLVCYKGHNYPVWDVQFSPY
GHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHVNCNYIATGSSDKTVRLWDI
QSGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGAIMMWDLASGRCITPLVGHTSCVWS
LAFSGEGSLLASGSADCTVKLWDVNASTKTPRSEEKTGSSNRLRSLRTLPTKSSPVYSLM
FSRRNLLFAAGVLSKRS
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggaggaagaagagatagagaaagccgtgcttgcgtatttgaagaagaaaggtttcagg
caaactgaagtcgcctttcaggaagaacagcaacttcagcaacaacaaaaacacccgcaa
caacaacaatcgaaaaattcgtcgtcgaattctcacactgacccagatgtcgccaagctc
atcctcacctttacctccgagtccgagagccttcctgcacaatattatgatgggtacagc
aagttaagatcatgggcccacaattccctagatttatacaagcatgaattgcttcgggta
ctttatccagtatttattcattgcttcatggatcttgttgcaagaggccatctacaagaa
gcccgtagttttttcattaccttccgtgaagatcatgaaactatgcatgaaagagatctg
cagaagctcgaaggagttctttcaccctctcatttgaaggagatggagtttgctcacact
ttaaggcagagcaaagtaaacatcaagatctgccagtactctcatgagcttctcctccag
tatctacttaaaattcagtcaatgcttggagttgtaaatgagcatatcaacttccaagtt
tgccccggccagcctggaatcatatctgatgatgctgacgctgtgacactggttgatggt
ggccaagatgcggcgaacttgataaatcagaaagaaattcagtgggggatgctggaagat
tcaatagaggatcgcttggagaagggtggaggtttgcttttagattctgataaggtagat
ggggaaaacaaggaaggagagaatgaagaaaataagaaaagatctgctgacggaggaaag
caagctgcaccagtgaaaaaatccaaaaaggataaagttggaggcgctggtggaaaagct
gcacgtccagaagtgatcactccattggcaccaagagtcaaaccagagcttactttgcct
gcaatgccaactgaagttgagcattctatcctggaagacctccgtaatcgtgtgcagttg
agtagtgtggccctgccatcagtaagcttctacacatttatcaatacacacaatggttta
aactgtgcatcaatttcacatgatggatccttggttgctggtggattttcagattcttcc
ttaaaggtttgggacatgtcaaagcttgggcaacaaatggataatactgctttacagggt
gaaaatgatacagctggaaatgaacatatgcatagtgcaaatggtggaaaaataccctat
actttgtttcagggtcattctgggcctgtttattcagcctcgttcagtcctcttggcgac
tttatcctctcttcgtcagcagattcaactgtgcggctttggagcacaaaactgaatgcc
aatctggtgtgctacaagggtcataattatcctgtatgggatgtgcagttcagcccctat
ggacactattttgctagttgttctcatgatagaacagcaaggatctggtccatggacaga
atacagcctctgagaatcatggctgggcatttgtcagatgttgattgtgtccggtggcat
gtaaactgtaactacatagctactggatctagtgataaaacagttcgattatgggatatt
cagagtggggagtgtgttaggattttcattggtcacaggagtatggtattgtctttggca
atgtcgcctgatggtcggtatatggcatctggtgatgaagacggtgcaatcatgatgtgg
gatcttgctagcggtcgttgcattaccccgttggtaggtcacacgtcatgcgtatggtca
cttgctttcagtggtgaaggctcacttcttgcctccggatcagctgattgcacagtaaaa
ctgtgggatgtcaatgcaagcacaaagacgccaagatctgaggaaaagactgggagctca
aacagactccggtcgttaaggactcttcctaccaaatcgtcgccagtttactctttgatg
ttttcgagaaggaatctgctatttgctgccggggttctttctaaacgctcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (23)   

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