KEGG   Spinacia oleracea (spinach): 110791116
Entry
110791116         CDS       T05137                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 40-like
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110791116
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soe03041]
    110791116
   03009 Ribosome biogenesis [BR:soe03009]
    110791116
Spliceosome [BR:soe03041]
 Complex A
  U1 snRNP components
   U1 related factors
    110791116
 Complex B
    110791116
Ribosome biogenesis [BR:soe03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    110791116
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WW ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 110791116
NCBI-ProteinID: XP_021851565
UniProt: A0A9R0JYY2
Position
3:complement(22260296..22269062)
AA seq 1171 aa
MANVEAASAAAGPRYAPDDPTLPNPWKGLIDGSSGLTYYWNPETNITQYEKPGSAPPSVP
SAVSHVDTASQPTVQQGPHHGQTADASQYQQQYMNQLSQQQGQFQALSGQVAQQQGLYQG
PPTGQMAQQQQQQQQQQQQQYAHYGQGLPQRGSQIGQTPVQQGQTTHQQHYGSQMTQQSG
QQMLPQQGSQPVQHPVQHSSQQLGSQPMHQGPMVGQSQGHHFMPQQMHYNAYQQPPMLPQ
GQQNAQPHPQLMPHGPQFSYEQDHRNVIPQQQNDSDFSKVKQAGTSMSQVEPSGRASGHA
PTSVNASNHGLQASPLSGQSQPVASSMHMHQPPPNVKLQESRNDIANPPHASTYQNQMGQ
SMMNSQQRGLSPVGRNMGFDETQQIRSGQGYPFNGNKEAPMMAPHHPNIAALPKARNQQD
SRMGAFPHQNAPPAHDGLNSVAAHGMHSMHNHANVDLPISNQHYMRPSPVMPGSSDVMNI
SSVEAYRLQHEVTATGENVPAPFMTFEATGFPPEILREIQSAGFSSPTPIQAQTWPIALQ
NKDIVAIAKTGSGKTLGYLMPAFMHLRQRRNNSRIGPTVLVLAPTRELATQILDEANKFG
RSSRISCTCLYGGAPKGPQLEELRHGADVVVATPGRLNDILETRNIDLRQVSLLVLDEAD
RMLDMGFEPQIRKIVNEMPPHRQTLMYTATWPKEVRKIAGDLLRNPVQVNIGNVDELAAN
KSITQYVEIVPHMEKQRRLEQILRAEERGAKVIVFCSTKKMCNDLTRSIGRTFPAAAIHG
DKSQVERDFVLNQFRSGKSPILIATDVAARGLDVKDIRVVINYDFPTGIEDYVHRIGRTG
RAGATGVAYTFFSEQDWKHAGDLVKVLEGANQQVPPQVREMALRGGPAFNKDRNGMNRFE
AAPGPAFSGGGRWDSGGRGGGMRDGGRGGMRDRDDNGGRGGFGGFRGGGMRNDGFGGRGM
RERDDFGRGGRGDFGGRGNRGERGGFGGPSGGYGGRSRDDYGSNDRSNNRDGGFGRGRGR
GRFDNNRRDVTPRSRGRSYSPSPDKVRTWGGYSRSVSRSRSRSRSRSWSRSRSPRRSYSR
SYSRSRSRGRSRSRSNERPVKRERRPSGFDKLPDPENHEQKDSAATTIGTPAEITNSNSI
PVYDAGAKLEVKEEPPVFSGVVNQSDPSATG
NT seq 3516 nt   +upstreamnt  +downstreamnt
atggcaaatgtggaagcagcttcagcagctgctggtccaaggtatgcaccagatgatcca
acccttccgaatccttggaaagggttgattgatgggagttcaggccttacatattactgg
aatccggagacaaacatcactcagtatgaaaagccaggcagtgcacctccatcagtgcca
tctgctgtatctcatgtggacactgcatcccaaccaactgtgcagcaagggccacatcat
ggacaaactgctgatgcttctcagtatcaacagcaatacatgaatcagttatctcagcag
caaggacagtttcaggctctatctggacaagtggctcagcaacaaggactgtatcagggt
ccccctactggacaaatggctcagcagcagcagcagcagcagcagcagcagcagcagcaa
tatgcacattatggacaaggattgcctcaaagaggctcacaaataggtcaaacaccagtg
caacagggacagacaacacatcagcagcactatgggtcgcaaatgacgcagcaaagtggt
cagcagatgcttccacagcaagggtcacagccggtgcaacatcccgtccagcatagttct
caacagttagggtcgcaaccaatgcatcaaggcccaatggtaggacaatcacaggggcat
cattttatgcctcaacaaatgcattataatgcttaccaacaaccaccaatgcttccacag
gggcagcaaaatgcacaacctcaccctcagcttatgccacatggacctcagttctcatat
gaacaagatcatagaaatgtgatacctcagcagcaaaatgattccgatttttcaaaggtc
aagcaagctgggacttccatgtctcaagttgagccaagtggtcgtgcatctggtcatgct
ccaacatctgtcaatgcttccaaccatggattgcaggccagtcctctctctggtcaatca
caacccgttgcttcctcaatgcacatgcatcagcctccaccaaatgttaaactgcaagag
agtcgaaatgatattgccaacccgccgcatgcttccacttatcaaaatcaaatgggtcaa
tccatgatgaatagtcagcaacgtggcctatctcccgttggaagaaatatgggttttgat
gaaacccagcaaatacgatctgggcaaggataccccttcaacggtaacaaggaagcacca
atgatggctcctcaccaccctaatattgctgcgctacctaaggcgaggaatcagcaggac
tcgaggatgggtgctttccctcatcaaaacgcgccacctgcccatgatggtttgaattca
gtagctgctcatgggatgcatagcatgcataatcatgcaaatgttgatctacctatctct
aaccaacattatatgaggccatctcctgtaatgcctggttcttcagatgttatgaatatt
tcttcagttgaggcttaccgactgcaacatgaagttactgccacgggagagaacgttcct
gccccatttatgacctttgaagccaccggttttcccccagaaatactaagagagatacaa
tctgctggtttttcttcaccaacaccaattcaagcacaaacatggcctattgcactacaa
aacaaagatatagttgcgattgctaagaccggttcagggaaaacgttgggatatttgatg
cctgctttcatgcatctaaggcaacggcggaataattcgaggattggtccgacagtctta
gtcttggccccaactcgtgaacttgctacacaaattctagacgaggccaataaatttgga
agatcttccaggatttcctgcacgtgcttatatggaggagctccaaaaggtcctcagctt
gaagaattacgccatggagctgatgtcgttgtggcaactcctggtcgtctcaatgacatt
cttgagacgaggaatattgatcttcgtcaagtttctctgcttgttcttgatgaggcagac
cgtatgcttgacatgggttttgagcctcaaattcgcaagattgtgaatgaaatgcctcct
cataggcaaactctcatgtacacagcaacttggccaaaagaagtcaggaaaatagctggg
gatttactacgcaatcctgtgcaggtgaacattggcaatgttgatgaacttgctgcaaac
aagtctatcacacagtatgtcgaaatcgtaccccacatggagaagcaaagacgcttggag
cagattcttagagccgaagagaggggcgctaaagttattgttttctgttctacaaagaag
atgtgtaatgatcttacacgtagtattggccgtaccttccctgctgctgcaattcatggg
gacaagtctcaggttgagagagactttgtgttgaatcaattccgctctgggaaatcacca
attttaattgcaactgatgttgctgccagaggccttgatgtaaaggacattagggtggtg
ataaattatgattttcctactggcattgaagactatgtacaccgaatcggtaggactggt
agggcaggggcaacaggagttgcttataccttcttttctgaacaggattggaagcatgct
ggtgatctggttaaagtgcttgaaggggctaaccagcaagtccctccacaagtgagagaa
atggctctccgcgggggtcctgctttcaataaagatcgaaatggtatgaataggtttgaa
gctgcccctggccctgccttttctggcggtggacgctgggattccggtgggcggggtgga
ggcatgagagatggtggtcgcggtggcatgagagacagagatgacaatggaggtcgtggt
ggttttggcggatttcgtggtggtggcatgagaaatgatggttttggagggcgtggtatg
agagagagagatgattttggacgtggtggacgaggtgattttggtggtcgtggaaatagg
ggagagcgaggaggatttggtgggcccagtggtggctatggaggtcggtccagggatgat
tatgggtccaatgataggtccaacaatagagatggtggatttggacgtggccgtggtagg
gggcgttttgataataacaggagagatgtgacaccgaggagtagaggaaggagttacagt
cccagccctgataaggttcgtacttggggaggttatagcagaagtgtgagccgtagccgt
tctcggagtagaagtcgaagctggagccgaagccgaagtccccgacggagctacagtcgg
agttacagccgtagtcggagtcgtggtcgtagccggagtcgcagcaatgagaggcctgtg
aagcgggaacgtcgtccatctggatttgataagctgccggacccggaaaatcatgagcag
aaggactcagcagcaactacaattggcactcctgcagaaattacgaatagcaattctatt
cctgtatatgatgctggggcgaagttagaggtgaaagaagagccacctgttttttcaggt
gtggtcaatcaatctgatccatcagcaacagggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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