KEGG T00099: SO

Shewanella oneidensis: SO_0541

Entry

SO_0541 CDS T00099

Definition

RNA-metabolizing metallo-beta-lactamase family protein

Orthology

K07576

metallo-beta-lactamase family protein

Organism

son Shewanella oneidensis

Class

SSDB

Motif

Pfam:

Beta-Casp Lactamase_B RMMBL Lactamase_B_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

560619..562061

AA seq 480 aa
MQMTLQFLGAAREVTGSCHLVTVAGKHLLLDCGLIQGGKADELRNHEPFVFDPQTIVAVV
LSHAHIDHSGRLPLLVKAGFDGPIYTHKATAELCAIMLKDAAMLQVRDTERTNKKRAKHD
LAPLEPLFTVEDAEQAISQFVSLEYGQVTRVIPHVDICLSDAGHILGSALVELWLGEGKS
QKKIVFSGDLGRAGMPILQNPTLVDTADLVLMESTYGNRFHRSWTDTLAELKDIFAKTVN
ESQGNILLPAFSVGRAQELLYLFHLYAKEWDLGRWKICLDSPMAIEATRVYVNNYPLMDE
DFKRFTRQHPGQHPLLSNVEFIQTTEESIALNEVHKGLIIIAGSGMCNGGRIRSHLEHNL
WRSECDVIICGFQALGTPGRALVDGAKELTIHGNSVNVAAKLHTVGGLSAHADQAELLRW
YRHFEEQPPLVLVHGEPEAQQGLVAVMNQDPKTKPKALAIATRGDMLDLTALPKLVWVTA

NT seq 1443 nt +upstreamnt +downstreamnt
atgcaaatgacattgcagtttttaggtgcagctcgggaagtcactggttcttgtcattta
gtcacagtggcggggaagcacctgttgctcgattgcggcttaatccaaggtggtaaggcg
gatgaattacgtaatcacgaacctttcgtctttgatccgcaaaccattgtcgccgttgtg
ctaagccatgcccatatcgaccattcagggcgtttaccgctcttggtcaaagcgggtttt
gatggacccatctatacccataaagccactgcagagctgtgtgccatcatgctgaaagat
gcggccatgctgcaggtgcgcgataccgaaaggaccaataaaaagcgcgctaaacatgat
cttgcccccctagagccacttttcaccgttgaagatgccgaacaggccatcagccagttt
gtttcgctggaatatggccaagtaactcgggttatcccccatgtggatatttgcctctca
gatgcggggcatattttaggctctgccttagtcgagctgtggttaggcgaaggtaagtcc
cagaagaaaatcgttttcagtggtgatcttggccgggcgggcatgcccattttgcaaaat
cctaccttagtggatacggcggatttagtgttaatggaaagcacctacggcaaccgtttt
caccgcagttggaccgatacccttgccgagttaaaggacatttttgctaagacagtcaac
gagagccaaggtaatatcttgctaccggctttctcggttgggcgggcacaggaactttta
tatctatttcatttatatgctaaagaatgggatcttggtcgctggaaaatctgtctagat
agccctatggcgattgaggcaacccgtgtctatgttaataattatccgttaatggatgag
gactttaagcgctttacccgccagcatccggggcaacacccattactgtcgaatgtggag
tttattcaaaccacggaagaatctatcgccctcaacgaggtgcataaagggttgattatt
attgctggtagcggcatgtgtaacggcggtcgtattcgcagccacctcgaacataatctg
tggcgatctgaatgtgatgtgattatctgtggtttccaagcactcggcacgcccggccgc
gccttagttgatggtgccaaggagcttactatccatggcaatagcgtcaacgttgctgct
aagttgcatactgtggggggcttatctgcccatgcggaccaggcagagttgttacgttgg
tatcgccattttgaagagcagccccctttggtgctggttcatggggagcccgaagcccag
cagggattagtggcggtcatgaatcaagatcctaaaactaaacctaaagcgctcgccatc
gccacccgtggcgacatgttggatttaaccgctttacccaaactggtatgggtgacggct
taa

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

Download RDF

DBGET integrated database retrieval system