KEGG T00099: SO

Shewanella oneidensis: SO_1930

Entry

SO_1930 CDS T00099

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase complex dehydrogenase E1 component SucA (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

son Shewanella oneidensis

Pathway

son00020	Citrate cycle (TCA cycle)
son00310	Lysine degradation
son00380	Tryptophan metabolism
son01100	Metabolic pathways
son01110	Biosynthesis of secondary metabolites
son01120	Microbial metabolism in diverse environments

Module

son_M00009	Citrate cycle (TCA cycle, Krebs cycle)
son_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:son00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:son00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:son00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

2034326..2037145

AA seq 939 aa
MHQGIMKAWLESSHLSGANSTYVEEMYEAYQEDPQSVSDDWRAVFDNLPPVNGASKDAPE
AAHSKVRDYFRSLAMEGRHKSAARVTDPELDAKQVKVLQLINAHRFRGHQGANLDPLELW
KREPVADLDPAFHGLTKEDMEREFNTGSFAHGGETMKLADLVKALKATYCGSIGAEYMHI
TDTDEKRWIQQRLEPSLGKANYDKSVKTRILEGLNAAEGIEKYLGAKFPGAKRFSLEGGD
ALVPMMREIIYRAGEAGTKEIVVGMAHRGRLNVLVNVLGKRPAELFDEFAGKHADTHGSG
DVKYHQGFSSDFETPGGNVHLALAFNPSHLEIVNPVVMGSVRARQDRRGCKDGLQVMPIT
IHGDSAITGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTSNHYDVRSTEYCTDIAK
MVQAPIFHVNSDDPEAVAFVAQLAVDYRNEFKRDVVIDLVCYRRHGHNEADEPSATQPLM
YAKIKKHPTPRKIYADKLIAENTIAADDVTGMINTYRDALDQGDCVVKEWRPMTLHTVDW
TPYIGREWDEAYDASLPIERLQKLADKLSYVPESHSLQSRVAKIYSDRVAMAKGEKPLDW
GFAETLAYATILEDKQRVRITGQDSGRGTFFHRHAVLHNQNDATTYLPLRNISDGQGPID
ITDSVLSEASVLAFEYGYATAEPSGLAIWEAQFGDFANCAQVVIDQFLSSGEQKWGRLCG
LTMLLPHGYEGQGPEHSSARLERFLQLCANHNMQVCVPSTPAQVYHMLRRQVVRPMRRPL
VVMSPKSLLRHPLAVSSMDELANGSFQNVIGEIDTLEASKVDRVVFCSGKVYFELLEKRR
KENINNIAIIRVEQLYPFPHEEMVAALADYQHVKDFVWCQEEPQNQGAWYSSQHHFWAAI
PAGAKLTYAGREASAAPACGYPELHAHQQESLVNSALKL

NT seq 2820 nt +upstreamnt +downstreamnt
atgcaccaaggcatcatgaaagcctggctcgaatcatctcacttaagtggtgcaaattcg
acctacgtagaagagatgtatgaagcctatcaagaagaccctcagtcagtttctgacgat
tggcgtgcggtttttgataatctccctccggtgaacggtgcctctaaagacgcgcctgaa
gcggctcactccaaagtacgtgattattttcgcagtttagcgatggaagggcgtcataag
agcgcagctcgtgtgaccgatcctgagttggatgctaagcaagttaaagtgctacagctg
atcaacgcccaccgtttccgtggtcaccaaggtgctaaccttgacccgttagaattgtgg
aaacgtgaacctgttgccgatttagatcccgcattccacggtctgaccaaagaagacatg
gagcgtgagttcaatactggctcgttcgcccacggcggcgaaaccatgaagttggcggat
ttagtcaaagcgcttaaagccacatattgtggttctatcggcgccgaatacatgcatatt
accgacaccgatgaaaagcgttggatccaacaacgtctcgaaccatccttaggtaaagcc
aactacgataaaagcgttaagacccgcattctcgaaggcctaaatgctgctgaaggcatt
gaaaaatatttaggcgctaaattccctggtgcaaaacgcttctctttagaaggtggcgat
gcgttagtgccaatgatgagagaaatcatttatcgcgcaggcgaagctggcactaaagaa
atcgtggtcggtatggctcaccgtggtcgtttaaacgtcctcgtgaacgtattaggtaag
cgtcctgctgagctgtttgacgagttcgcgggtaagcatgctgatacccacggttctggt
gacgttaagtaccaccaaggtttctcatctgattttgaaacaccaggtggcaatgtgcat
ttggcgctggctttcaacccgtctcaccttgaaatcgttaatcctgtggttatggggtct
gtacgtgctcgtcaagaccgtcgtggttgcaaagatggtttacaggtgatgcctatcact
atccacggcgattctgctattactggtcaaggtatcgtacaagagacattcaacatgtct
caaacccgtggctttaaagtgggtggtagtatccgtatcgttgtgaacaaccaagtgggc
tttaccacttcaaatcattacgatgtgcgttcaactgaatactgtactgatatcgcgaag
atggtacaggcaccgattttccacgtaaattcagacgatccagaagccgtcgcctttgtt
gcgcagcttgccgttgattaccgtaacgagtttaaacgtgatgtggtgatcgacttagtg
tgttatcgccgtcatggccataacgaagctgatgagccaagcgcaactcagccactaatg
tatgccaagatcaagaaacacccaacgccacgtaagatttacgctgacaaactgatcgca
gaaaacaccattgctgccgatgacgtgaccggcatgatcaacacttaccgcgatgcttta
gaccaaggtgattgcgtagtgaaagaatggcgtccaatgacactgcataccgtagattgg
actccttatattggtcgcgaatgggatgaagcctatgacgcttcactgcctatcgaacgt
ttgcagaaactagccgataagctgagctacgtgcctgaaagccattctctgcaatcccgt
gttgctaagatttatagtgaccgtgttgcaatggcaaaaggggagaagccacttgattgg
ggctttgctgaaaccttagcttacgcaacgattcttgaagataagcaacgtgttcgcatt
actggtcaagactctggccgcgggactttcttccaccgtcatgcggttctgcataaccaa
aacgatgcgactacgtatttaccactgcgtaatattagcgatggtcaaggtccaatcgac
attactgactcagtactctctgaagcctcagtattggcattcgaatatggttacgcaacg
gcagagcctagtggtttagccatttgggaagcgcaatttggtgactttgctaactgtgca
caggtcgtgattgaccagttcttatcttctggtgagcaaaagtggggccgtttatgcggt
ctgaccatgctgttgcctcacggctacgaaggtcaaggtccagagcactcaagcgcccgt
ttagagcgtttcttacagctttgtgctaaccacaatatgcaagtgtgtgtaccatcaacg
cctgcacaggtttaccacatgctgcgtcgccaagtggtgcgcccaatgcgccgtccactg
gtggtgatgtcacctaagtcattgctacgtcacccattagcggtttctagcatggacgaa
ttggccaatggcagcttccaaaacgtgattggtgaaatcgatacgttagaagcgagcaag
gtcgatcgcgtggtgttctgtagcggtaaggtgtacttcgaactactcgaaaaacgccgt
aaagaaaacatcaataacatcgcaattatccgtgtcgaacagttatatccgttcccacat
gaagaaatggttgcagcattagctgactaccaacatgtgaaggattttgtttggtgtcag
gaagagccgcaaaaccaaggtgcttggtactctagccaacatcacttttgggctgctatc
cctgcgggagcaaaactcacttacgctggccgtgaagcgtctgctgcaccagcttgtggt
taccctgagttgcatgctcaccaacaagaatctttagtgaacagtgccttaaagctctaa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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