KEGG   Shewanella oneidensis: SO_2633
Entry
SO_2633           CDS       T00099                                 
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
son  Shewanella oneidensis
Pathway
son04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:son00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    SO_2633 (trmU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:son03016]
    SO_2633 (trmU)
Enzymes [BR:son01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     SO_2633 (trmU)
Transfer RNA biogenesis [BR:son03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    SO_2633 (trmU)
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_C tRNA_Me_trans_M NAD_synthase ThiI QueC Asn_synthase ATP_bind_3 Diphthami_syn_2
Other DBs
NCBI-ProteinID: AAN55661
UniProt: Q8CX40
Position
2768721..2769839
AA seq 372 aa
MTSIEPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDL
KDAQAVCDKLGIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFA
DDILDADYIAMGHYVRRRDNEDGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELE
KHEVREIAKQMGLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGNIETADGEVIGTHQG
LMYHTLGQRKGLGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHW
VDRKGPINGSQIVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGEVC
LGGGIIDQLIRG
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgacatcaatcgaacccactcatacaggtaaaaaagtcattgtcggcatgtccggcggt
gttgattcatccgtttcagcctatttgcttatgcagcaaggctatcaggttgaaggcctt
ttcatgaagaactgggaagaagatgacaacgacgagtactgcgcggccgccgaagattta
aaagatgctcaagccgtttgcgataagcttgggatcaaactccacacggtcaactttgct
gccgaatattgggacaatgtatttgagtatttccttgccgaatacaaggcgggtcgtacc
cccaatcccgatatcatgtgcaacaaagaaatcaaatttaaggcctttttagagtttgcc
gacgatattctcgatgccgactacatcgccatgggtcactatgtgcgccgccgcgataac
gaggatggcacgacgcaaatgctgcgcggtgtcgacaacaataaagatcaaagctatttc
ctgtacaccttaagccatgagcaagtggcgcgcagtctgtttccggtgggtgaactcgaa
aaacacgaagtacgcgaaatcgccaaacaaatgggattaattacccatgataaaaaagat
agcaccggcatttgctttatcggcgagcgaaaatttactgaatttttaggtaattactta
cccgcacagcccggcaatatcgaaaccgccgatggtgaagtgattggcacgcaccaaggt
ttgatgtaccacactttaggccaacgtaaaggtttggggattggcggcatgaaaaacagc
aacgacgacccatggtacgtggtggataaagatctcaaacgtaacgtgcttgttgttggc
caaggtggtcaccacccgcgcttgatgtccaatggcatgttagtcaatcaactgcactgg
gtcgatcgtaaaggccctatcaatggcagccagattgtggtgaaaacccgttatcgtcag
caggatatcccctgtaccctcacctatctagatgacaatacgctcaaagtcgtgtttgat
gagcccgttgcagccgtaacgcccgggcagtcagccgtcttttacgatggcgaagtatgc
ctcggtggcgggattatcgatcaactgatccgaggataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (47)   

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