KEGG   Shewanella oneidensis: SO_3023Help
Entry
SO_3023           CDS       T00099                                 

Gene name
trpB
Definition
tryptophan synthase beta subunit TrpB (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
son  Shewanella oneidensis
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:son00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    SO_3023 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SO_3023 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    SO_3023 (trpB)
Enzymes [BR:son01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     SO_3023 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
3134870..3136060
Genome map
AA seq 396 aa AA seqDB search
MSQLKLNPYFGEYGGMYVPQILVPALKQLESAFVEAQTDESFQAEFTDLLKNYAGRPTAL
TLTRNLSPNPMVKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVAT
ALACALLGLKCKVYMGAKDVARQSPNVFRMRLMGAEVIPVTSGSATLKDACNEAMRDWSG
SYEKAHYLLGTAAGPHPFPTIVREFQRIIGEETKKQILEREGRLPDAVIACVGGGSNAIG
MFADFIDETNVELIGVEPAGKGIDTHMHGAPLKHGKTGIFFGMKAPLMQDSEGQIEESYS
ISAGLDFPSVGPQHAHLNAIGRARYESATDDEALEAFQLLARCEGIIPALESAHALAYAL
RLAKECTKETILVVNLSGRGDKDIFTVSDILNGKEE
NT seq 1191 nt NT seq  +upstreamnt  +downstreamnt
atgtcacagttaaagcttaacccttatttcggcgaatacggtggtatgtatgtaccacag
attttagtcccagccctcaagcaactcgaaagtgcctttgttgaagcgcaaaccgatgag
tccttccaagccgagtttaccgacttactgaaaaactacgcgggccgccctactgcgctc
accttaacccgcaatttaagccccaatcccatggtaaaaatctacctcaagcgggaagat
ttactccacggcggcgcacataaaaccaaccaagtgctaggccaagcgttactggctaaa
cgtatgggtaaaaaggaaattattgccgaaaccggcgcaggccaacacggtgttgccacc
gcacttgcctgtgcactgctgggattaaaatgcaaagtgtatatgggcgcgaaagacgtt
gcccgccaatcacccaacgtatttagaatgcggctgatgggcgccgaggttatccctgtg
acctctggttctgccaccttgaaagatgcctgtaacgaggcgatgcgcgactggtctggc
agttacgaaaaagcccactatctgctcggcacagctgctgggccacatccgtttccgacc
atagtgcgtgaattccaacgtattattggtgaagaaaccaaaaaacaaatacttgagcgc
gaaggtcgcctgcccgatgcagtcatcgcctgtgtcggcggcggttccaatgctatcggt
atgtttgccgactttatagatgaaaccaatgtcgagctgattggggtcgagcctgcgggt
aaaggtattgatacccatatgcatggcgcgccgttaaagcacggtaaaacggggattttc
tttggcatgaaagccccactcatgcaggacagcgagggccaaatcgaagaatcttactcg
atttcagcaggattagacttcccctcggtcggcccacagcatgcccatttgaacgccatc
ggccgcgcccgttatgaatcggccaccgacgatgaagccctcgaagccttccaattactg
gctcgctgtgaagggattattccggcactcgaatcggcccacgccctcgcctatgcactg
cgtctggcgaaagagtgcaccaaagaaaccattttggttgtcaacctctcaggccgaggc
gataaggatattttcactgtgtcagacattttaaatggtaaagaggaataa

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