KEGG   Shewanella oneidensis: SO_3024Help
Entry
SO_3024           CDS       T00099                                 

Gene name
trpA
Definition
tryptophan synthase alpha subunit TrpA (EC:4.2.1.20)
Orthology
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
son  Shewanella oneidensis
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:son00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    SO_3024 (trpA)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SO_3024 (trpA)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    SO_3024 (trpA)
Enzymes [BR:son01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     SO_3024 (trpA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
3136066..3136902
Genome map
AA seq 278 aa AA seqDB search
MNSISNQTIPHQASRYQAAFSRLKAEGRGAFVPFVTLGDPSPELSLKIIDTLVQNGADAL
ELGFPFSDPLADGPVIQGANLRALAAGTTPTACFELLAKIRAKYPELPIGLLLYANLVFA
NGIDAFYAKAQQAGVDSVLIADVPVEEAAPFIQAAKAHGIAPIFIAPPNADSDTLAKVSQ
SGEGYTYLLSRAGVTGADTKAGTPVEEILAKLQEFNAPPPLLGFGIAEPAQVSAAIKAGA
AGAISGSAVVKIIETHQQDEVKLLAALGEFTRTMKAAT
NT seq 837 nt NT seq  +upstreamnt  +downstreamnt
atgaacagcatttcaaaccaaactatccctcatcaagccagccgttatcaagcagcgttt
agccgtttaaaagccgaaggccgtggcgcctttgtgccctttgtcaccttaggcgatcca
agccctgagctgtcacttaagattatcgacaccctagtgcaaaacggtgccgatgcgctg
gagttaggctttcctttctctgatccgctcgccgatggccccgtgatccaaggcgcaaac
ctcagagccttagccgctggcacaacgccaacagcctgctttgaattgctggccaagatc
cgcgctaaataccctgaacttcccataggtttattactgtatgcgaacctcgtattcgcc
aatgggatcgatgctttttatgctaaagcgcagcaagcgggcgtggattcagtgttaatt
gccgatgtgccagttgaagaagccgcgccttttattcaagctgccaaagcccatggcatt
gcgccaatttttattgcgccgcccaatgccgacagcgacacccttgcgaaggtcagccaa
agtggtgaaggttatacttatttgctgtcgcgcgctggcgtaacgggtgccgacactaaa
gcaggtacgcctgtcgaagagatattagccaaattacaagagtttaatgccccgccgccg
ctgttaggctttgggattgcagagcctgcccaggtgagcgccgccatcaaagcgggcgct
gcaggcgcaatctctggctctgcggtggtgaaaattatcgaaactcatcaacaggatgaa
gtgaaactgctcgcagcattaggcgaatttacccgcacaatgaaagcggcaacctaa

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