KEGG T00099: SO

Shewanella oneidensis: SO_3024

Entry

SO_3024 CDS T00099

Gene name

trpA

Definition

tryptophan synthase alpha subunit TrpA (EC:4.2.1.20)

Orthology

K01695

tryptophan synthase alpha chain [EC:4.2.1.20]

Organism

son Shewanella oneidensis

Pathway

son00260	Glycine, serine and threonine metabolism
son00400	Phenylalanine, tyrosine and tryptophan biosynthesis
son01100	Metabolic pathways
son01110	Biosynthesis of secondary metabolites
son01230	Biosynthesis of amino acids

Module

son_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:son00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:son00400]

SSDB

Motif

Pfam:

Trp_syntA

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

3136066..3136902

AA seq 278 aa
MNSISNQTIPHQASRYQAAFSRLKAEGRGAFVPFVTLGDPSPELSLKIIDTLVQNGADAL
ELGFPFSDPLADGPVIQGANLRALAAGTTPTACFELLAKIRAKYPELPIGLLLYANLVFA
NGIDAFYAKAQQAGVDSVLIADVPVEEAAPFIQAAKAHGIAPIFIAPPNADSDTLAKVSQ
SGEGYTYLLSRAGVTGADTKAGTPVEEILAKLQEFNAPPPLLGFGIAEPAQVSAAIKAGA
AGAISGSAVVKIIETHQQDEVKLLAALGEFTRTMKAAT

NT seq 837 nt +upstreamnt +downstreamnt
atgaacagcatttcaaaccaaactatccctcatcaagccagccgttatcaagcagcgttt
agccgtttaaaagccgaaggccgtggcgcctttgtgccctttgtcaccttaggcgatcca
agccctgagctgtcacttaagattatcgacaccctagtgcaaaacggtgccgatgcgctg
gagttaggctttcctttctctgatccgctcgccgatggccccgtgatccaaggcgcaaac
ctcagagccttagccgctggcacaacgccaacagcctgctttgaattgctggccaagatc
cgcgctaaataccctgaacttcccataggtttattactgtatgcgaacctcgtattcgcc
aatgggatcgatgctttttatgctaaagcgcagcaagcgggcgtggattcagtgttaatt
gccgatgtgccagttgaagaagccgcgccttttattcaagctgccaaagcccatggcatt
gcgccaatttttattgcgccgcccaatgccgacagcgacacccttgcgaaggtcagccaa
agtggtgaaggttatacttatttgctgtcgcgcgctggcgtaacgggtgccgacactaaa
gcaggtacgcctgtcgaagagatattagccaaattacaagagtttaatgccccgccgccg
ctgttaggctttgggattgcagagcctgcccaggtgagcgccgccatcaaagcgggcgct
gcaggcgcaatctctggctctgcggtggtgaaaattatcgaaactcatcaacaggatgaa
gtgaaactgctcgcagcattaggcgaatttacccgcacaatgaaagcggcaacctaa

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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