KEGG   Shewanella oneidensis: SO_3423Help
Entry
SO_3423           CDS       T00099                                 

Gene name
holC
Definition
DNA polymerase III chi subunit HolC (EC:2.7.7.7)
Orthology
K02339  
DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
son  Shewanella oneidensis
Pathway
Purine metabolism
Pyrimidine metabolism
Metabolic pathways
DNA replication
Mismatch repair
Homologous recombination
Module
DNA polymerase III complex, bacteria
Brite
KEGG Orthology (KO) [BR:son00001]
 Metabolism
  Nucleotide metabolism
   00230 Purine metabolism
    SO_3423 (holC)
   00240 Pyrimidine metabolism
    SO_3423 (holC)
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    SO_3423 (holC)
   03430 Mismatch repair
    SO_3423 (holC)
   03440 Homologous recombination
    SO_3423 (holC)
Enzymes [BR:son01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SO_3423 (holC)
DNA replication proteins [BR:son03032]
 Prokaryotic Type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SO_3423 (holC)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
3563019..3563483
Genome map
AA seq 154 aa AA seqDB search
MTQALFYLMPPTGENTALSDLYQLACRLSQRAFIDQQQVYIHCQDKNVAFEIDELLWQFD
PSAFVPHNLKGEGPTTGSPVEIGFDRLGPNKSRQLLINLADQVPPFAVNFGQIFDFVAND
DQHKVIARERYRQYRGLGIELTTQNLATHPLNLV
NT seq 465 nt NT seq  +upstreamnt  +downstreamnt
atgacacaagcgctgttttatctgatgccaccaacgggcgaaaacacagctctgagtgat
ttataccaattggcttgccgcctatcccaacgagcgtttatagaccaacaacaggtctac
attcattgccaagataaaaatgtagccttcgaaattgacgagttattgtggcagtttgat
cccagtgcttttgtcccacacaacctaaaaggtgaaggcccaaccactggttcacccgtt
gaaatcggttttgatcgacttggacctaacaaaagtcgccaacttctgattaatcttgca
gaccaagtaccgccatttgcggtaaactttggtcaaatcttcgattttgtggctaatgac
gaccaacataaagtgatagcacgtgaacgctaccgccaataccgtggcctagggattgaa
ttaacaacccaaaatctagcgacacatccacttaatttagtttga

DBGET integrated database retrieval system