KEGG T00099: SO

Shewanella oneidensis: SO_4122

Entry

SO_4122 CDS T00099

Gene name

priA

Definition

primosomal replication protein N' PriA (EC:3.6.1.-)

Orthology

K04066

primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]

Organism

son Shewanella oneidensis

Pathway

son03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:son03440]

SSDB

Motif

Pfam:

DEAD Helicase_C ResIII AAA_30 TrwB_AAD_bind T2SE AAA_19 zinc-ribbons_6

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

4280604..4282817

AA seq 737 aa
MSLFVEVALPVPMRQNFTYRVKTNEQNDDSPQAKPQIGVRVKVPFGRQQLIGLVTAITDS
CDLAPTQLKSVIEFIDDAPLLPESLYKLTLWAARYYFCSQGQMLTQALPVALRKGLDAAP
QKIQYWQITTIGSNIAPETLKRAPAQKKLLEHLKQTSLTQEEVISLELNKTALKTLEEKG
WIAQHEKIAQLNLDWRSQLELDETPHRLNKEQAVAVTVLTQQQGYHCTLLEGITGSGKTE
VYLALLEHILKQGKQALILVPEIGLTPQTINRFKRRFRVNVAVLHSGLTDNQRLEAWRQA
RCGQAAIIIGTRSALFTPMAFPGVIILDEEHDSSFKQQEGVGYHARDLAVMRGHLESIPV
VLGSATPSLESLQNALSGRYHHLQLGERAGNAKKVRQGIIDIKNLPLKAGMSAPLINEIR
SHLDAGNQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCGNQYAI
PRQCHNCGSTMLMGQGIGTEQLAEALQLEFPKYPVVRIDRDTTRLKGSLESHLSAIHKGE
YKILVGTQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVAGRAGRANKLG
TVLLQTHQSDNPILRDLLHRGYGEFARSQLKERQMALLPPAWHMVLVRAEAHSALDADNF
LNSFASLLPQDKEFEIIGPMPAPLDRKAGKFRRQLMFQAKHRHRLQQEFERIYPLVEQLP
EAKRCRWSLDRDPQDLL

NT seq 2214 nt +upstreamnt +downstreamnt
atgtcactgtttgttgaagttgcgttacctgtgcctatgcggcaaaactttacttatcgc
gtaaagacaaacgaacaaaacgatgatagcccccaagccaaaccacagattggcgtacgg
gtaaaagtgccctttgggcggcagcaacttattggtctcgttaccgccatcaccgacagc
tgcgatctggcgccaacacaactcaaatccgtcatagagtttattgatgacgccccctta
ttgccagaatcgctttataaattaaccctctgggccgcaagatattacttttgcagccaa
ggacaaatgctcacgcaagccttgccggtggcactgcgcaagggcttagatgccgcacca
caaaaaatccaatactggcaaatcactacaataggcagcaatattgcgccagaaacatta
aagcgcgcgcccgctcaaaaaaaattactcgagcatttaaagcaaaccagtctcacacag
gaagaagtcatcagcttagagctgaataagaccgcgctcaaaaccttagaagagaaaggc
tggattgcccagcacgaaaaaatcgcgcagctcaatctcgattggcgcagccaactcgaa
ctcgatgaaacgcctcacaggctaaataaagagcaagccgtcgccgtgacggtattaacg
cagcagcaaggataccactgtactctgctcgaaggcattaccggttcgggtaaaaccgaa
gtctatttagccttgctcgaacatattcttaagcaaggtaagcaagcacttattcttgta
cctgaaattggcctcaccccgcaaaccatcaatcgctttaagcgccgttttcgggtgaat
gttgccgtgctgcactcgggtttaaccgacaatcagcgcctcgaagcctggcgccaagcc
cgttgcggccaagctgccattattattggcactcgctccgcgttgtttacgccgatggca
tttcctggcgtcatcatcctcgacgaagaacacgacagtagctttaaacagcaagaaggt
gttggctatcacgcccgcgacttagcagtgatgcgcgggcatttagaatcgatccctgtg
gttttaggctcagcaacaccgtcattagaaagcctgcaaaatgcactcagtggccgctat
catcatctgcaactcggtgaacgggctggcaatgctaaaaaagtacgccaaggcattatc
gatattaaaaacctgccgctcaaagcgggcatgtcggcgccactgatcaatgaaatccgc
agccatttggatgccggaaatcaagtattactatttttaaaccgccgcggctttgcgcca
gcactgctctgccacgagtgtgggcacttacatgaatgcgaccgctgcgatgcatttttt
actgtgcatcaatccttaggcgagatccgttgccaccactgcggtaatcaatatgccatt
ccaaggcagtgtcacaattgcggcagtaccatgttgatgggacaaggtattggtaccgag
cagctcgccgaagcactgcaattagagtttccaaaatatccagtggtgcgtatcgatcgc
gataccactcgccttaaaggttcacttgaaagccatttaagtgcgattcataagggcgag
tataagatcctcgtcggtacccaaatgctggccaaggggcaccactttccagatgtcacc
ttagtgggattacttgatgttgatggcgcactctttagcgccgattttagggcgccagag
cgcttcggccagctttatacccaagtcgcaggccgcgcagggcgggccaataaactcggt
accgtactattgcaaactcaccagagcgataacccgatccttagggatttactccaccga
ggttatggtgagtttgcccgcagccaattaaaagaacggcaaatggcgctcttaccaccc
gcttggcatatggtactggtgcgcgccgaggcccattctgccttagatgctgacaatttt
cttaattcgtttgcatccttgctgccccaagataaagagtttgagattatcggccctatg
cccgcgccactcgatcgaaaagcaggtaagttccgccgccagttgatgtttcaggccaag
cacagacataggttgcagcaggagtttgagcgtatttatccgcttgtggaacaactgccc
gaagccaaacgctgccgctggagcttagatagggatccgcaggatctgttgtga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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