KEGG   Shewanella oneidensis: SO_A0012
Entry
SO_A0012          CDS       T00099                                 
Symbol
umuC
Name
(GenBank) DNA polymerase V subunit UmuC
  KO
K03502  DNA polymerase V
Organism
son  Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:son00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:son03400]
    SO_A0012 (umuC)
DNA repair and recombination proteins [BR:son03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    SO_A0012 (umuC)
SSDB
Motif
Pfam: IMS DUF4113 IMS_C IMS_HHH
Other DBs
NCBI-ProteinID: AAN52951
UniProt: Q8E897
Position
megaplasmid:complement(10078..11334)
AA seq 418 aa
MFALVDANSFYCSCEQVFRPDWRGKPVVVLSNNDGMVVAANRQAKEAGIPKFVPYFQIRD
LCQKKGVIALSSNYELYADLSAKMMQIIGRFAPEQYVYSIDESFLSFTRCYPAITCLKTQ
AQAIRRAVWKEARLPVCVGIGSTLTLAKIANHAAKKISGYAGVCVIESEPQRLAILQQMP
VGEVWGIGRRLSAKLTLMGITTAAQLAAMPPGLARKQFSIEIERTVRELNGQVCKQWDEA
RADKQQIFSTRSVGERIIDIDALQQALCKHAGIAAAKARQQGSSCKSMLVFASNSPHDER
PVSYKAVVQFPCPTSSTAEITAAVSRVLPQVFRSGVRYYKIGVGLIELMPTKHIQYDLFH
APTENPALMQTFDKLNQRYGSDCIFMAAQGIEHKWAMRRDKLTPQYTTKWLNLPKVQC
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgtttgcccttgttgatgccaatagtttttactgcagttgcgagcaggtgtttcggccc
gattggcgtggtaaaccggtggtggtgctcagtaataacgatggaatggtcgtcgctgcc
aatcgccaagcgaaagaagcgggcatccctaaatttgtgccctactttcaaatacgcgat
ctttgccagaaaaaaggcgtgattgcgctatcgtccaattacgaattgtatgcggatttg
tcggccaaaatgatgcaaatcatcgggcgctttgcgcccgaacaatacgtatattcgatt
gacgaatcctttctctcttttacccgctgctatcccgctatcacgtgtttaaaaacgcag
gcacaggcgatccgccgtgctgtgtggaaagaggctcgcttaccggtgtgtgttggcatt
gggagcaccttaacgctcgccaaaatcgctaaccatgccgctaaaaaaatatctggttat
gccggtgtttgcgtgattgagtcagagccgcaacgcctagcgatattgcaacaaatgcca
gtgggtgaagtgtggggcattgggcggcgcttgtctgccaaattaaccctaatgggcatt
actacggcggcgcaattggcggctatgccgccagggctggcacgtaaacaatttagtatt
gaaatcgagcgcactgtgcgcgagttaaacggccaagtgtgcaaacaatgggatgaagcg
cgggccgataaacagcaaatattttcaacccgtagcgttggcgagcgaattatcgatatt
gatgcgctgcagcaagcactgtgtaagcacgctgggatcgctgccgcaaaagctcggcaa
caaggctcaagctgtaaaagcatgttggtatttgccagtaattcgccacatgatgagcgg
cctgtgagttataaagctgtggtgcagtttccttgccctacttcatccactgccgagatc
acggctgcagtatcacgagtgttaccacaagttttccgctctggtgtgcgttattacaaa
attggcgtggggttaattgaattaatgcctaccaagcatattcagtatgatttgttccat
gcccccaccgaaaaccccgcattgatgcaaacttttgataagttaaatcaacgctatggc
agtgattgtatatttatggcggctcaaggtattgagcataaatgggccatgcgcagggat
aaattaaccccgcaatacactactaagtggcttaatttgcccaaagtgcagtgttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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