KEGG   Solanum tuberosum (potato): 102581685
Entry
102581685         CDS       T02981                                 
Name
(RefSeq) uncharacterized LOC102581685
  KO
K03504  DNA polymerase delta subunit 3
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03030  DNA replication
sot03410  Base excision repair
sot03420  Nucleotide excision repair
sot03430  Mismatch repair
sot03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102581685
   03410 Base excision repair
    102581685
   03420 Nucleotide excision repair
    102581685
   03430 Mismatch repair
    102581685
   03440 Homologous recombination
    102581685
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sot01009]
    102581685
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sot03032]
    102581685
   03400 DNA repair and recombination proteins [BR:sot03400]
    102581685
Protein phosphatases and associated proteins [BR:sot01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102581685
DNA replication proteins [BR:sot03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    102581685
DNA repair and recombination proteins [BR:sot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      102581685
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     102581685
SSDB
Motif
Pfam: CDC27 MsyB
Other DBs
NCBI-GeneID: 102581685
NCBI-ProteinID: XP_006360034
UniProt: M1BWU3
Position
Un
AA seq 534 aa
MADIETLGIVDEIQALVSDKLQVVSYKWLSRNFLVSSNSAKRLLQEFVEKHGSGLEVVYS
LSGWLKDSPSTYHIRLVSSANLAEAKKEFSDDCSVQVYSVQACIPKDPVALWNSEFVQAE
ELFRQSLSVDNCLLDNRFCGVSNPFITRSGGGTIPSTNTVPQVKSEASGLRNSNSTAQVK
PELKKVQLPSPSASVPSSHVVDAKSESRGTSGPGEGSKFVADKHKVAQLPPAKKAVQSEK
TSSKNGGALANMWGRVPTKPKVEIVSAATSDATPNPVGNAAQICTPEGVEDRISDDDDQQ
VSIRRTSNGEGNRKRRVIFDFSDEEDEFKDAVNLASPDPPKQKSILGSKQTPSTPELEKR
EVKKVKEAGSKSNEQETFSKKSHEQETFSKRSHEQERKPLPTSEPKSSKLHSSEIISEHA
SPKNAAVKDEVTNAAPTSPKRRKVMKTRIDERGREVTEVVWEGEDTEIKADSNTMKKADN
NPVNSTGDRAPMAKKSPALGSSAPTNQASKAGNKKAGNKDPKQGNILSFFKKKA
NT seq 1605 nt   +upstreamnt  +downstreamnt
atggcggatatcgaaaccctaggcatcgtcgatgagattcaagctcttgtatcagacaaa
cttcaagtggtttcgtacaagtggctgagtcgaaattttttggtgtcatcaaattctgca
aagaggttgcttcaggaatttgttgaaaagcatggaagtggtcttgaagtagtctacagc
ttgtctggctggttgaaagatagcccttcaacctaccatataagacttgtctcttctgct
aacctcgcagaagccaagaaagaattttcggatgattgctcagtccaggtctatagcgtg
caagcttgcatcccaaaggatccagtggccctctggaattctgaatttgtccaggccgaa
gagctatttaggcagtccctctcagttgataattgtttgcttgataataggttttgtgga
gtttcaaatcctttcatcacgcgcagcggtggaggaacaattccaagcactaatactgtt
cctcaggtgaaaagtgaagcttcaggacttcgtaatagtaactctactgctcaagtgaaa
cctgagctgaaaaaggttcaactaccaagtcctagtgccagtgtgccatcttcacatgtg
gttgatgccaaaagtgagagtcgtggcacatcaggtcctggagagggtagtaagtttgtt
gcagataaacacaaagttgctcaacttccacctgctaagaaggcagttcagtctgaaaaa
acttcttctaaaaatggtggggcattggctaatatgtggggtcgtgtacctacaaagcca
aaagtcgaaattgtttcagctgctaccagtgatgccacaccaaatcctgttggtaatgcg
gctcagatatgtactccagaaggagtagaagataggatcagtgatgacgatgatcaacaa
gtcagcatcaggagaacatcaaatggtgaggggaatagaaaaaggagggtaatttttgat
ttttcggatgaagaagatgaattcaaggatgctgtcaacctagcctcacctgatcctcca
aagcagaaatctattttagggtcaaaacaaactcctagtactccagaactggaaaagcgg
gaagtcaagaaagtaaaggaggctggcagcaagagtaatgagcaagaaacattctcaaaa
aagagtcatgagcaagaaacattctcaaaaaggagtcatgagcaagaaagaaaaccttta
cctaccagcgaacctaagtcttctaagttgcattcttcagagattatttcagaacatgcc
agtcctaagaatgctgctgtaaaggatgaagtcaccaatgctgctccaacttcccctaaa
agaagaaaagtaatgaagacacgaattgacgaacgtggaagagaagtgaccgaggttgtt
tgggaaggtgaagatacagaaataaaggctgacagtaatacaatgaagaaagctgacaac
aatccagttaatagtactggtgacagagcacctatggctaagaagtctcccgctctggga
agttccgcacctacaaatcaagccagtaaagcaggaaacaagaaagctggaaataaggat
cctaaacaaggaaatatcctatcattttttaagaagaaggcttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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