KEGG   Solanum tuberosum (potato): 102582465
Entry
102582465         CDS       T02981                                 
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
  KO
K14808  ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sot03009]
    102582465
Enzymes [BR:sot01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102582465
Ribosome biogenesis [BR:sot03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    102582465
SSDB
Motif
Pfam: DEAD Helicase_C DBP10CT P-loop_SecA
Other DBs
NCBI-GeneID: 102582465
NCBI-ProteinID: XP_006361031
Position
Un
AA seq 787 aa
MAILVSSKAELKRREKQKKKAKSGGFESLGLSSNIFRGIKRKGYRVPTPIQRKTMPLILS
GFDVVAMARTGSGKTAAFLVPMLEKLKQHVPQAGVRALILSPTRDLALQTLKFTKELGRF
TDIRVSLLVGGDSMESQFEELAQSPDIIIATPGRLMHHLSEVDDMSLRTVEYVVFDEADC
LFSMGFAEQLHTILTRLGENRQTLLFSATLPSALAEFAKAGLRDPQLVRLDLDTKISPDL
KVAFFTVRQEEKHAALLYLIREQTTSDQQTIVFVSTKYHVEFLNILLREEGVEASVCYGD
MDHDARKIHVSRFRARKTMVLIVTDVAARGIDIPLLDNVINFDFPTKPKLFVHRVGRAAR
AGRIGTAYSLVTSDDMAYLLDLHLFLSKPIRAAPTEEEVFQDMDGVLSKIDQAVANGETV
YGRFPQTVLDLLSDRVREIIDHSTELETLQRPCTKAFGLYSKTKSRPSKESIKRVKDLPR
EGLHPMFKNDLRGNELSAMAFSERLKAFRPKQTILEAEGEAAKSKKQNQMVDVMKMKRAI
HEEVINKVRQQRSSVPASKEDDFDPTPSKRKEKQVSGSKRKSKIFKDEEYFISAVPTNQH
FEAGLAVRGNHGFESKRLDAAVLDLVADDKNGLQKQKVSYHWDKRSKKYIKLNNGDRVTA
SGKIKTESGSKGKTNKTGIYKKWKDQSHKRVSLNGTNDGNSAAQSTSLAGGPRGQDGGRN
FRGGRNNRSVPNAHVRSEIKDVDQVRKEREKKAQRASYLKTKKGKKAYKGGKKGKGNGKG
KGKGRQG
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggcgattctggttagctccaaagcggagctgaaacgtagagagaagcagaagaagaag
gcaaaatcaggaggatttgagtcattaggtttaagctctaatatcttcagaggaatcaaa
cgaaaaggttacagagttcctacgcctattcagcgcaaaacaatgccacttatactctct
ggattcgatgttgttgctatggcccgtactggttctggtaaaacggcggcgttccttgtg
cctatgcttgagaaattgaagcagcatgtgcctcaagctggtgttagagctctaattctt
tctccaactagggatttggcgcttcaaacacttaagtttaccaaagaacttggtcgattc
acagatattcgggttagtttgttggttggtggtgatagtatggaaagccaatttgaagaa
ttggcacaaagtcctgatattataattgcaactcctggtcggctcatgcaccatttatct
gaggttgatgatatgtcactgcgcactgtggagtatgttgtttttgatgaagctgattgt
ttgtttagcatgggttttgctgagcaattgcatacaattctcacccgtctaggtgagaat
cgccagactctgcttttcagtgcaactttacccagtgcccttgctgaatttgccaaggct
gggcttcgagaccctcagcttgtgaggcttgatttggatacaaagataagtccagacttg
aaggttgcatttttcactgtaagacaggaggagaagcatgctgcacttctgtatctgatt
cgtgaacaaacaacttctgatcagcaaactatagtttttgtttccaccaagtatcatgtt
gagttcctcaacattcttttaagagaagagggtgttgaagcttctgtttgttatggtgat
atggatcacgatgctcgcaaaattcatgtttctagatttagagcaagaaagaccatggtg
ctcattgtgactgatgtggctgctagaggaattgatattccactgcttgataatgttatc
aactttgattttcctaccaaacctaaactttttgttcatcgagttgggcgagctgcaagg
gctggtcgtattggcactgcatattctcttgtcacatccgacgacatggcttatttgtta
gatcttcatctctttctatctaaaccaatcagggctgcaccaactgaggaagaggttttc
caagatatggatggagtcctgtccaaaatagatcaagcagttgccaatggagaaactgtc
tatggacgttttccacaaactgttctagatctcctctcagatagagttcgggaaatcatt
gatcattcaactgaactagaaactctgcaaaggccatgtactaaagcatttgggttgtac
tcaaagacaaaatcaaggccttctaaagagtccattaaaagagtaaaagacctaccccgc
gaagggttgcatccaatgttcaaaaatgacctccgtggtaatgaattatcagcaatggcc
ttttctgaacgcttgaaggccttcagacctaagcagacaatcctggaagctgaaggtgaa
gccgctaagtcaaaaaaacaaaatcaaatggttgatgtgatgaagatgaaaagagctatt
catgaggaggtcatcaataaagttcgtcaacagcgctcgagtgttcctgcttcaaaggaa
gatgattttgatcccacaccttcaaaaaggaaggagaaacaagtttctggttctaaaagg
aaatcaaagatttttaaagacgaggagtacttcataagtgcggtaccaacaaatcagcat
tttgaggctggactcgccgtgaggggaaaccatggttttgaatcaaaaaggttggatgct
gctgttctagatttggtagctgatgacaagaatgggttgcagaaacaaaaggtttcatat
cattgggataagaggagtaagaaatacatcaagctcaacaatggagatcgtgttacagct
agtgggaagataaagacagagagcggctctaagggaaaaaccaacaaaactgggatatac
aagaagtggaaagaccaatcacacaagagagtatctcttaatggaactaatgatggaaac
tctgctgcacaatcaactagtttagctggtggtcctagaggtcaagatggtggcagaaat
ttcagaggtgggagaaacaataggtcagtacctaacgcccacgtgcgatcagaaattaaa
gatgttgatcaagttcggaaggaaagagagaagaaggcccaaagagcatcatatttgaag
accaagaaggggaaaaaggcttacaaaggtggcaaaaagggaaagggaaatggaaagggt
aagggaaagggaagacaaggttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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