KEGG   Solanum tuberosum (potato): 102592116
Entry
102592116         CDS       T02981                                 
Name
(RefSeq) multisubstrate pseudouridine synthase 7
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sot03016]
    102592116
Enzymes [BR:sot01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     102592116
Transfer RNA biogenesis [BR:sot03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    102592116
 Prokaryotic type
    102592116
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-GeneID: 102592116
NCBI-ProteinID: XP_006347775
Position
Un
AA seq 685 aa
MKTMDESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLTLLEAPKECSENKD
VNISDQLNRSYVTEIESFRSLAGNSDADKLKAFIDELNSGADVSDESIVLSPSSDKSHRT
AIHNFFKERLKFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRSSRKRKDRDDKRYDSRGS
DSWPGHLGKFLRFHLFKENKDTQEALNVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFK
QQASKLAALNKRLIGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVAL
GKHGFINYFGLQRFGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNAISTVREYYKE
SGDIDGTLRQLPRYLVAEKAILQCLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA
SMRVQKHGFDQVVLGDLVYSKEEYKVKESFVAECEDVNDNNMDDYSNLDEISETDLPEER
NIPVKVINEEDLKSGTYAIDDVLLPLPGSRVIYPSNDIGEVYCDLAQKDDISLTETAHKI
KEFSITNMTGAYRRVFQKPKDFEWELLSYTDGTIPLAETDFDVIANSVKSKVREEDPTNG
SKELPADSSAISVGGDMLSGKVCEEKINNEAGMQSEKSQSGGNAEESQMALKLSFTLPAS
CYATMAVRELLKTSTSVAFHKSLND
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgaaaactatggatgaatctgatgtgggtatctcttgctacatttccaacctccctggc
tttcgtggcatcctcaagcaaaggtactccgacttcattgtaaatgaggtggacttagat
gaaaatgttgttcatttgactttgttggaggctccaaaggagtgttcagagaacaaggac
gtgaatatatctgaccaactgaatagaagttatgtgactgagatagaatctttcagatct
ctcgctggcaattctgatgctgacaagcttaaagcttttattgatgaacttaattctggg
gctgatgtcagtgatgaatccatcgtcctttcaccaagttcagataaatcccatcggact
gcaattcataactttttcaaggaaagattaaaattccttgtaactgatacaattgatgga
gtagaggaccaatcaaagtgtgttcgtgtgagattgaataacgacaggaataatggaagg
ggtagatcctctaggaaaaggaaagaccgagatgataaacgttatgacagtagaggttca
gacagttggccaggacatcttggcaagttcctcaggtttcatcttttcaaggagaataag
gatacacaggaagctttaaacgttatagcaaagatgcttggcgttcagcttaggtccttt
ggatttgctggtactaaagataagcgtgctgtttcaactcagagggtaactgttttcaag
caacaagcaagtaaattagcagctctcaacaaaagattgattggtatcaaagttggtgac
ttttgccatgttaaagaagggcttctgcttgggcagctttatgggaaccgatttactata
acacttaggggagtgtcagcagagtctgaggatataattaaagcatcagcagttgccctt
ggaaaacatgggtttataaactattttggcttacagcggtttggcagcagttctgtgcca
acacatctaattggagctgcattattgcgtggagaatggaaagctgctgtcagcttgatt
cttgatccaagagaaggggagaagaatgccatcagtacagtaagggagtattacaaggaa
agtggtgacattgatgggactctaaggcagttacctcgttatctggttgctgaaaaggca
attttgcagtgcctgaaaagatctcctggaaactatctacaagctctgaaggccataccc
aggactctccgaatgatgtatgttcatagctatcaaagttatctttggaaccatgcggca
agcatgagagtgcaaaaacatgggtttgaccaagttgtgttgggagatttggtgtattca
aaagaagagtataaagtgaaagaatcttttgttgctgaatgtgaagacgtgaatgacaat
aatatggatgattatagcaatctggatgagatctcagagactgatcttcctgaagaaaga
aatataccagtcaaggttataaatgaagaagaccttaaatctggtacatatgccattgat
gacgtacttctacctttgcctgggtctagagttatttatccatcaaatgacattggtgaa
gtttactgtgacttggctcaaaaggatgacatcagcttgaccgagactgcacataagatc
aaagaattctccataaccaatatgaccggagcttacagacgtgtgtttcaaaagccgaag
gattttgaatgggaattgcttagttacactgatggaactatacctctggctgagacagat
tttgatgtcattgccaattcagtaaaaagcaaggtcagagaggaggacccgaccaatgga
agcaaagagcttcctgctgactcttcagctatctctgtaggtggtgacatgctttctgga
aaagtgtgtgaggaaaagattaacaatgaagcagggatgcaatcagagaaatctcagagt
ggtggtaatgctgaggagagccagatggctctcaagctgagctttacactaccagcttct
tgctatgcaactatggctgtgagggagctgctgaaaacatccacttctgttgcatttcac
aagtcactaaatgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system