KEGG   Solanum tuberosum (potato): 102594403
Entry
102594403         CDS       T02981                                 
Name
(RefSeq) eukaryotic initiation factor 4A-2-like
  KO
K03257  translation initiation factor 4A
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102594403
   03012 Translation factors [BR:sot03012]
    102594403
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sot04147]
    102594403
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     102594403
   mRNA cycle factors
    Stress granule specific factors
     102594403
Translation factors [BR:sot03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    102594403
Exosome [BR:sot04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102594403
  Exosomal proteins of bladder cancer cells
   102594403
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 CMS1 AAA_19 Flavi_DEAD
Other DBs
NCBI-GeneID: 102594403
NCBI-ProteinID: XP_006342502
UniProt: M1CUZ8
Position
Un
AA seq 410 aa
MAAEGSQFDARQFDAKMTELLGTEQQEFFTSYDEVHDSFDAMGLQENLLRGIYAYGFEKP
SAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVECQALVLAPTRELAQQ
IEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHI
KMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILV
KRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRD
HTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENY
LHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPANVADLL
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggcagcagaaggttctcagtttgatgctcgtcaattcgatgcgaaaatgacagagctg
cttggtactgaacaacaggaattcttcacatcatatgatgaggttcacgacagttttgat
gccatgggtttgcaagaaaatctcctgaggggaatctatgcgtatggttttgagaagcca
tctgctattcagcaaaggggcattgttcctttttgcaagggccttgatgttatccagcag
gcacaatctggtactggaaagacggcaactttctgctctggaattctccagcagcttgat
tacagtttagttgagtgtcaggctctggttcttgcaccaacccgcgagcttgcacaacag
attgagaaggttatgagagcacttggtgactacctgggtgtgaaggttcatgcttgtgtt
gggggtacgagtgtacgtgaggatcagcgcatccttcagagcggtgttcatgttgtggtt
ggtactccaggccgtgtctttgacatgttgcgcaggcagtctcttcgccccgaccacatc
aagatgtttgttttggatgaagctgacgagatgctctctagaggtttcaaggatcagatt
tatgatatattccagcttttgccaccaaaaatccaagtgggtgttttctctgccactatg
ccaccagaggctcttgagattactagaaaattcatgaacaaacctgtgagaattctcgtg
aagcgtgatgagctcactcttgaaggtattaagcaattttatgtcaatgtcgataaggaa
gagtggaagcttgaaacactttgtgatctttacgagaccttggccatcacccagagtgtc
atctttgttaacactaggcgaaaggttgactggctcactgataaaatgcgtggtcgtgat
cacacagtatctgcaactcacggagacatggatcagaacacaagagatatcattatgagg
gagttccgatctggctcatctcgtgtgcttatcacaaccgatctccttgctcgtggtatt
gatgtccaacaagtctctcttgttattaactatgacctgccaactcaaccagaaaactac
ctgcatcgtattggtcgtagtggacgatttggaaggaagggtgttgctatcaactttgtc
accaaggatgacgaaaggatgctttttgacatacagaagttttacaacgtcgtagttgag
gagctcccagccaatgttgctgatctcctttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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