KEGG   Solanum tuberosum (potato): 102597378
Entry
102597378         CDS       T02981                                 
Name
(RefSeq) nuclear pore complex protein NUP54
  KO
K14308  nuclear pore complex protein Nup54
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102597378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102597378
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102597378
SSDB
Motif
Pfam: Nup54 Neuregulin DUF3181
Other DBs
NCBI-GeneID: 102597378
NCBI-ProteinID: XP_006343165
Position
Un
AA seq 372 aa
MFGAKPSSAFGTPSFGTPSSTPAFGTPSSTPAFGTPSTSSFGTGFGSTLFSTPFSQQAQP
QPHQQQQTSFFQTPQSLSPFSFSTPLSTATQAQSSPFGTSFPFANAQLTTQMAPVAPLPF
SLADRDIQAIVDAYKEEPGNPKYAFKHLLCSVTEPQYRTKPAGVSDIMWAEAMGKLEGME
STDRERLWPQLVHGFKDLSQRLKLQDEVIVSDAERLQMTQNNVKMLQRHFQADTLPWIER
MRHKEQGLQRRLLRVMRILEALEGKGCRLPLMKGEAELAEKLAAITRQLKGSGAELSRRV
QNLLTICRVQNGLGGGSVYLPGSTKIHEQSLADMQEVLQQQTEAIARLGNVLKRDIRDVE
IIMAEETEMMEG
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgttcggagctaagccctcctccgccttcggtactccatcattcggcacaccttcgtca
accccagcattcggcacaccttcatcaaccccagcattcggcacgccgtcaacttcatca
tttggcactggttttggatcgacactattttcaacaccattttcacagcaggcacagcca
cagccacatcaacagcaacaaacttccttctttcaaacacctcagagtttgtcccctttc
agcttttccacacccttgagtactgctacacaggcccaatccagtccatttggtacttcc
tttccatttgcaaatgctcagttgactactcagatggctcccgtggctccactccccttt
tctctcgctgatagggatatacaagcaattgttgatgcgtacaaggaggagcctggtaac
cctaaatatgctttcaagcatcttttgtgcagtgtgacggaacctcaatataggacgaaa
cctgcaggggtatctgatataatgtgggcagaggcaatgggcaaacttgaaggcatggag
agtactgaccgtgagcgcctgtggcctcaacttgttcacggcttcaaggatctttcccaa
cggctcaagcttcaagatgaagtcatagtttcagatgctgagagactgcaaatgacgcag
aacaatgtgaaaatgttgcaaaggcatttccaagctgatacccttccttggattgaaaga
atgagacacaaagagcaaggtcttcaaagacgccttttgagggtgatgagaatactagag
gcacttgaaggtaaaggttgtcgattgcctttgatgaaaggagaggctgaattggcagag
aagttggctgccatcacgagacagttaaaaggttctggagcagaactttctaggagggtt
cagaatctgctcaccatatgtcgtgttcaaaatggccttggaggtggttctgtttatctc
cctggttcaactaagatccatgagcagagtcttgctgacatgcaggaggttttgcaacaa
caaaccgaggctattgctaggcttggcaatgtattgaagcgagatatccgagatgtggag
atcataatggctgaggaaacagaaatgatggaaggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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