KEGG   Solanum tuberosum (potato): 102597680
Entry
102597680         CDS       T02981                                 
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102597680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102597680
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     102597680
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     102597680
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 102597680
NCBI-ProteinID: XP_006339670
UniProt: M0ZGZ8
Position
Un
AA seq 243 aa
MEYVNPEGLRLDGRRPMEMRQLRAEIGVVSRADGSASFEMGNTKVIAAVYGPREVQNRSQ
QMNDQALVRCEYSMANFSTGDRRRKTKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIY
VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYLEDSAGGAD
VTVGILPKLDKVTLLQMDAKLPMDIFENVMQLAVEGCKAVESHIREILLENAQTLVIRQG
YGS
NT seq 732 nt   +upstreamnt  +downstreamnt
atggagtacgttaatcccgaaggtctccgtttagatggtcgccgtccaatggagatgaga
caacttcgtgctgaaataggggttgtgtcgagagcagatggttctgcctcttttgaaatg
ggtaataccaaagtcattgctgcagtttatggtcctagggaggttcagaacaggagccaa
cagatgaatgaccaggctctggtacgctgcgagtatagcatggctaatttcagcactggc
gatcgccggagaaaaacaaagggtgataggagatccacggagatatctcttgttattcgc
cagacaatggaagcttgtatattgactcacctgatgcctcgctctcagatagacatttat
gtccaagtcctccaagcagatggaggtacaagatcagcatgcataaatgctgccacactg
gcactagctgacgccgggattcccatgcgtgatcttgtcacatcgtgcagtgctggttac
ctgaatagcacacctcttcttgatttaaactacttggaagacagtgctggaggagctgat
gtcactgtaggaattttacctaagttggacaaagtgacccttctgcagatggatgctaaa
ctaccaatggatatttttgaaaatgtcatgcaattagcagttgaaggctgcaaagcagtg
gaaagccacatccgagaaatattgttagaaaatgctcagacattggtgattcgccaaggg
tatggctcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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