KEGG   Solanum tuberosum (potato): 102602221
Entry
102602221         CDS       T02981                                 
Name
(RefSeq) nuclear pore complex protein NUP96
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102602221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102602221
   03036 Chromosome and associated proteins [BR:sot03036]
    102602221
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102602221
Chromosome and associated proteins [BR:sot03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    102602221
SSDB
Motif
Pfam: Nup96 Nucleoporin2
Other DBs
NCBI-GeneID: 102602221
NCBI-ProteinID: XP_006341370
UniProt: M1B498
Position
Un
AA seq 1033 aa
MEVELGTPEQLIVSQSQCKRRKISALDQILGENEADLPTLRSPDYFTDPCLSELAVRELM
ISGYCSKVENFTVGRFGYGFVKFSGETDVRGLDLDRIVKFSRHEVIVYEDENDKPPVGMG
LNKPAEVTLLLEIRSSKHYDVDSSRELVEKLRLRTERQGARFISFDPSNGEWKFFVQHFS
RFGLNDEEEDEDMIIDAVSPEVQDPVDMNGGDVSDIDEETFLANTTDLSHSLPAHLGLDP
VKMKEMRMLMFPAEEEDIDDYHGVPFDRKPQFSKESSKSPLQHKFQRVSPPLTRKTPLAL
IEYKHGSFGSDSPGSILLTQQNKGVLLKTTKTEGFKLDVRQQTPISGTYSCNVVDAGLFM
GRSFGVGWGPNGVLIHSGAPVGSKDDQCLSSIINLEKVAFDQVARDENKKFREELVDLCF
DSTLHLHKEITHETKEFGEGPFALKLQRLMCDRLMLSDVCRSYIGVIERQLEVPDLSPAS
RVLLMHQAMIWELIKVLFSTRQLSGKLKSLEDEDEEDMIPDARETSSDVDPEALPLIRRA
EFSYWLQESVCHRVQEEVSSLNDSSDLQHMFLLLTGRQLDAAVELAASRGDVRLACLLSQ
AGGSMVNRSDVARQLDIWRVNGLDFNFVETERIRVFELVAGNIHRALHDVDIDWKRFLGL
LMWYQLPPETELPIVFRTYQRLLNEGKAPSPVPVYIDEGPIEVSMNWHAVKHSDLGYYLM
LLHANQEIDFSALKTMFSAFASTNDPLDYHMIWHQRAVLEAIGAFSSNDLHVLDISFISQ
LLCLGQCHWAVYVVLHMPHREDCPYLQAALIREILFQYCETWSSQDLQRQFIEDLGIPSA
WLNEALATYFNYYSEFPKALEHFLECGKWQKAHTIFMTSVAHSLFLSEEHSEIWRLAASM
EDHKSEIEDWDLGAGIYISFYLLRSSLQEGSDTMNQDTIENKDNACADFISRLNNSLAVW
TNRLPVKARVVYSKMAEEICNLLLSDSGGSSSNEAQLSCYDTIFKAPIPEDTRAYHLQDS
VSLFTSYLSEVPS
NT seq 3102 nt   +upstreamnt  +downstreamnt
atggaggttgagttagggactcctgaacaacttattgtttctcaatctcaatgtaaaaga
agaaaaatttctgctttagatcagattttgggcgagaacgaagctgatttacctaccttg
cgatctcctgattattttactgatccatgcttgagtgaattggctgttagggagctaatg
atctcagggtattgcagtaaagttgaaaattttactgttgggaggtttggttatggattt
gtcaaattttctggggaaacagatgttagggggttggatttggatcgaattgttaagttt
agcagacatgaggtgattgtatatgaagatgaaaatgacaagcctccagttggcatgggg
cttaacaaacctgctgaagtaactttgctactggaaatacgatcctccaaacactatgac
gtggattcttctagagaactggtggagaaattaagacttagaacagagagacaaggagcg
cgttttatctcatttgatccatcaaatggagaatggaaattcttcgttcagcatttcagc
agatttggtttgaatgatgaggaagaagatgaagatatgataattgatgctgtgtctcca
gaggttcaagatcccgtagatatgaatggaggagatgtttctgacattgatgaagaaacc
ttcttagccaatacaactgatctttcacattctcttcctgcccatcttgggttagatcct
gtaaagatgaaagaaatgagaatgctgatgtttccagcagaagaagaggatatagatgat
tatcatggtgttccttttgatagaaaaccacaattcagtaaagaatcttcaaaatcccct
ttgcagcataagttccagagagttagtccacctttaactcgcaagactccattggctttg
attgaatacaaacatggtagttttggctcggactcacctgggtccattttgttgacccaa
caaaataagggtgtgcttctaaagacaacaaagactgaaggtttcaagctggatgtcagg
cagcaaacacctataagtggaacctactcttgtaatgttgttgatgcgggattgttcatg
ggtagatcatttggagttggctgggggcctaatggtgttcttattcattctggcgctcca
gttggtagtaaagacgatcaatgtttgtcctcaataatcaatttggagaaggttgcattt
gaccaagtagctagagatgaaaataaaaagtttagggaggaacttgttgatttgtgtttt
gattcaaccctccatcttcacaaggaaattactcatgaaaccaaagagttcggggaggga
ccctttgcgttaaagcttcaaagacttatgtgtgatcgtctaatgctttcagatgtatgt
cggagctatattggtgtcattgagaggcaattggaggttcctgacttatctccagcatcc
cgtgttcttctgatgcaccaagcaatgatttgggaattaataaaagtgcttttctcgaca
agacaattgagtgggaaattaaagtctcttgaagatgaggatgaggaagatatgatacct
gatgcgagagaaacttcttcagatgttgatccagaagcacttccattgataaggagagca
gaattcagctattggttgcaagagagtgtttgtcacagggtacaggaagaagtaagttct
ttgaatgattcaagtgatctacaacatatgtttttacttctaactggtcggcagctggat
gctgctgtggaactggcggcttctagaggagatgtgcggcttgcatgtcttcttagtcaa
gctggtggttcgatggttaatcgttctgatgttgctaggcagcttgatatttggagagtg
aatgggttggacttcaattttgttgagacagagaggattagggtttttgagttggttgct
ggcaacattcatagagcattgcatgatgtagacattgactggaaaaggtttctggggttg
ttgatgtggtatcagcttccaccagaaactgaattgcctattgtgttccgcacatatcag
aggcttcttaatgaaggaaaagctccatctccagttccagtttatattgatgaaggacct
atagaagtgtcaatgaattggcatgcagtgaaacattctgacctcggttactatcttatg
cttcttcatgccaatcaagaaattgatttcagtgctctaaagacgatgttcagtgccttt
gcttcaacaaatgatccccttgactaccatatgatctggcatcagcgagctgttttagaa
gccattggtgctttcagttctaatgatcttcatgtgctagacattagtttcatttctcag
ctgctatgccttggtcaatgtcattgggctgtctatgtggtgcttcacatgcctcaccgt
gaagattgtccttatttgcaagctgctcttattagggaaatactcttccagtactgtgaa
acttggagttctcaggacttgcagcggcaatttattgaggatctaggtattccatcagca
tggttgaacgaggctttggcaacatattttaattattactctgaattccccaaagcccta
gaacattttttggaatgcggaaagtggcagaaagcgcacactatttttatgacttcagtt
gctcattctctttttctatcagaagaacactcagaaatatggaggctagcagcttccatg
gaggatcacaaatcagaaattgaagattgggatctgggagctggaatatatatatctttt
tatttgttgagaagttctttgcaggagggcagtgacactatgaatcaagacactatagaa
aacaaagacaatgcttgtgcagacttcattagtcgcttaaacaactctttggctgtttgg
acaaacagattgcctgtcaaagcgagggtggtttattcgaaaatggctgaggagatatgc
aatttgctgctttctgatagcggtggaagttcatcaaatgaggcccagctaagctgctac
gataccatattcaaggcacccatacctgaagatacccgtgcataccatttgcaggattct
gtgtctctttttacatcttacctttctgaggtgccgtcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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