KEGG   Solanum tuberosum (potato): 102602740
Entry
102602740         CDS       T02981                                 
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102602740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102602740
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102602740
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     102602740
SSDB
Motif
Pfam: EDC4_C Ge1_WD40 WD40
Other DBs
NCBI-GeneID: 102602740
NCBI-ProteinID: XP_006352541
Position
Un
AA seq 1428 aa
MAAAGNPNQSGGTPFDMHTFFKPSTPVSTNLNTQNPINPNLISSQFMLPSASYPPPTAGG
AGGGTGGGAGGLYYPPQTTPFHNIPQFNHNTPPQYNNHQPQHDGYMHPQRSMSFPAPPLQ
PPPTPTSPHQFLNPGNNPNPNPGARLMALLSAPPSTPEVLQQPTVQLLPLQPTTSGSELS
DFSASPNVGIAHSGSSPLRMPSRKLPKGRHLNGDHVVYDIDDRLPGEVQPQLEVTPITKY
GSDPGLVLGRQIAVNKSYICYGLKLGAIRVLNINTALRSLLKGLAQRVTDMAFFAEDVHL
LASASVDGRVYIWKITEGPDEEDKPQITGRIVTAIQIVGEGESLHPRVCWHCHKQEILVV
GIGRHVLKIDTTKFGKADVFSADEPLRCPVDRLVDGVQLVGTHDGEVTDLSMCQWMTTRL
VSASVDGTIKIWEDRKPQPIAILRPHDGNPVHSATFLSAPDRPDHIILITGGLLNREMKI
WVSASKEGWLLPSDAESWHCIQTLELKSSAEARAEETFFNQVVALSQAGLLLLANAKKNA
IYVVHLEYGLNPMATHMDYIAEFTVTMPILSFTGTSDLLPHGEQIVQVYCVQTQAIQQYA
LDLSQCLPPLMENGVGFERTESNVSRDAASIEGYVPVDLPGSKQMEFPLTSAAPKTLVNE
SATEIVATARPLMTDARTALATSVEFASSIAESKSSSLPSITTDTDIAPFTSPPPLSPEL
ARKLSGFRSISNSSEPGPSVNDHFGDPKAVEYSVDRQMDAIHPNLTGLTSSDGDPMKNED
DVSRDDGSSCISNTVKFKHPTHLVTPSEILMANSSSEVNHVNEHKSEGQSSIQDVVINKE
ARDVEVEVKNVGETRFSQKTDIGSQEELHTFVSDNKEKPFCSQASDLGIEMARECRALSP
ETCIVEESRQFDGVSGTEQLIQASTAPEEDRDSAKEISGNNLDSNVQVSAHQPPASSAKG
KKQKAKNTQGFEPASPSPGSFKSSDSNEGGVSSSNTSMEAAVSQILSMREKLNQVLNMQK
ETQKQMGMMVAVPVTKEGRRLEAALGQSMEKAVKANSDALWVRYQEDSAKQEKLLRDRTQ
QITNLISNCFNKDMPGLIEKIMKKELAAVGQAVTRSIVPIIEKTVSTAISEAFQKGVSDK
AVNQLEKTVSSKLEASVARQIQAQFQTSGKQALQETVKSTMEGSVIPAFEMSCKAMFEQV
DLTFQKGFAEHTGFALQQFESMHSPLVHALRDAINSASSMTQTLSGELADGQKKLLTLAV
SGANSKSSNPLVSHMSNGPLLHEKLEAPVDPIKELSRLLAERKYEEAFTTALHRTDVSIV
SWLCLQVDLSGILSMNPLPLSQGVLLSLLQQVACDITNETSRKLSWMRDVVSAINPTDPV
IVLHVRPIFEQVYQKLNHHRTLPTTTPAELSSIRLIMHVINSMLHAPC
NT seq 4287 nt   +upstreamnt  +downstreamnt
atggctgccgccggaaatccaaaccagtccggtggaacaccgtttgatatgcatactttc
ttcaagccttcaactccagtttcaacaaacctgaatacccagaaccccattaacccgaat
ttgatttcttcacaatttatgcttccttcagcttcttatcctccgcctactgccggcggc
gccggtggtggtacaggaggaggtgccggaggactttactacccaccccagacaacccct
tttcacaatatccctcaattcaatcacaatactcctccacagtataacaaccatcaacct
caacatgatggatatatgcatccgcaaagatctatgtctttccctgctccaccacttcaa
ccaccacccacccctactagtcctcaccagttcttgaatcctggaaataacccgaatcct
aaccctggggctcgacttatggctttgttaagtgcgccaccttcaactcctgaagttctt
cagcaacccactgtgcaacttcttcctttacagcctacaacttctgggtctgagctttct
gatttttctgcttcaccaaatgttggtattgctcattcagggagtagcccgttgcgaatg
ccgagtaggaagttacctaaagggagacatttgaatggggatcatgttgtttatgatata
gatgataggttgcctggtgaagtgcagcctcagctggaggttactcccattaccaagtat
ggttcggatccgggacttgttttaggcaggcaaattgcagttaacaaaagctatatatgt
tatggactcaaattgggagctattcgtgtgcttaacattaacaccgcgttgaggtcattg
cttaaaggtcttgcacagagggtcacagacatggctttctttgctgaggatgttcacctt
ttggctagtgcaagtgtcgatgggcgtgtttatatatggaaaattactgaaggaccagat
gaggaagataagccccaaattacagggaggattgtcactgctattcaaatagttggtgag
ggggaatctcttcatccccgagtttgttggcattgtcacaaacaagaaattcttgtggtc
gggatcggaagacatgttttaaaaattgataccacaaaatttggaaaagctgacgttttt
tcagcagatgaacccctcaggtgtcctgttgacaggttggttgatggggtacaacttgtt
ggtactcatgatggagaagtgactgatttgtcaatgtgccagtggatgaccactcgattg
gtatctgcatcagtggatggcacgataaagatttgggaagaccggaagcctcaaccaatt
gcaattctcaggcctcatgatggtaatcctgttcattcagccaccttcctgtctgctcca
gaccgcccagatcacatcatactcatcactgggggtttacttaatcgggaaatgaagata
tgggtatcagcaagtaaggaaggctggttacttcctagtgatgctgaatcatggcactgt
atacaaacattggaattgaagagttctgctgaagctcgtgctgaagagacattttttaac
caagttgtagcgttgtctcaagcaggtctgctcttattagcgaatgcaaaaaagaatgcc
atatatgttgttcatctagagtatggcctgaacccaatggcaacccatatggattacata
gctgaatttacagttacaatgccaattttgagtttcactggaacaagtgatttactgcct
catggtgaacagattgttcaggtgtactgtgtacagacgcaggctattcagcagtatgct
ttggacttatcccaatgcttgccacctctgatggagaatggtgtgggcttcgaaaggacg
gaatctaatgtttcacgtgatgctgctagtattgaaggatatgttcctgttgatcttcct
ggtagtaaacaaatggagttccctttaactagtgctgcacctaaaactttagtgaatgag
agtgccacagagattgtagctacagctagacctcttatgactgatgcacgcactgcattg
gccacctctgtggaatttgcttcttctattgcagaatctaaatcatctagtttacccagt
attactactgatactgatattgctccctttacatcaccaccacctttgagtcctgagttg
gctagaaaactttctggtttcagaagcatatcaaacagctctgagcctggtccctctgtc
aatgaccattttggggatcctaaagctgttgaatattcagttgacaggcaaatggatgcc
attcatccaaacttgactggccttacttcgtcagatggtgacccaatgaaaaatgaagat
gacgtgtcccgtgatgatggttcttcgtgtattagtaatacagttaaattcaagcaccct
actcatctagtgactccttcagagatattgatggctaactcatcttctgaggtaaaccat
gttaatgaacataaaagcgagggacaatcaagtatccaggatgttgtaatcaacaaggaa
gcccgcgatgtggaggtggaagttaagaatgttggtgaaacaagattcagtcaaaaaact
gatattggctctcaagaagaacttcatacttttgtgtcagataacaaggagaaacccttt
tgctctcaggcatctgatcttggaatagaaatggctcgagaatgtcgtgccttatcgcct
gaaacttgtattgtcgaggaatctaggcagtttgatggggtttctggaactgagcagctg
atccaagcatcaacagcccctgaagaagatcgtgactctgcaaaggagatctctggaaat
aatttagactcaaatgtgcaagtttctgctcatcaacctccagcttctagtgccaaaggg
aaaaagcaaaaggcaaagaacactcaaggatttgaaccagcttcaccctcacctggttct
ttcaagtcatctgattccaatgagggtggtgtcagctcaagtaacacctctatggaagct
gcagtctcacaaattttgtctatgcgtgagaagctaaatcaggttcttaatatgcaaaaa
gaaacgcaaaagcagatgggtatgatggttgctgttccagttaccaaagaaggaagaaga
cttgaggctgccttgggacagagcatggagaaggctgtcaaggccaattccgatgcttta
tgggtccgttaccaagaagatagtgctaaacaagagaaattacttcgtgatcgtactcaa
caaataaccaatttgatatctaactgctttaacaaggacatgccagggctaattgaaaaa
ataatgaagaaagaactggcagctgttggacaagccgtcacacgcagtattgtccctatc
attgagaaaactgtatcaactgctatttcagaagccttccagaaaggagttagtgacaag
gcagtaaaccaactggagaaaacagttagctctaaacttgaagcttctgttgctaggcaa
attcaagcacaattccagacctctggcaagcaggctcttcaggaaactgtgaaatctaca
atggaaggttcggtgatccctgcctttgagatgtcatgcaaggcaatgtttgagcaagta
gatttaacgtttcagaaaggatttgctgaacacactggtttcgctctacagcaatttgag
tccatgcattcaccgttagtacatgctttaagggatgccattaattccgcatcatcgatg
actcaaacattgagcggagagctagctgatggtcaaaagaagttgcttacgcttgcagtt
tctggagcaaattccaagtcatcgaatccactggttagccacatgagtaatggaccatta
ctgcatgagaagcttgaggctcctgttgatccaatcaaagagttatctagattgttggcg
gagcgcaagtacgaggaggcattcactacagccttgcacagaactgatgtgtctattgta
tcgtggttatgtttgcaggttgatctgtcgggtatcttatcaatgaatcctctcccgttg
agtcaaggagtacttctttcacttcttcagcaggtggcgtgtgatattaccaacgagaca
tctcgaaaattatcctggatgagggatgtggtatcagccataaatccaactgacccggtg
attgtactgcacgtgcggcctatttttgagcaagtatatcagaaactaaaccatcatcgg
actctccctaccacaacccccgcggaactttcaagcattcgtctgataatgcatgttatc
aactccatgctccatgctccatgctaa

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