ID GCSP_PSESM Reviewed; 954 AA.
AC Q887L5;
DT 19-SEP-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 01-MAY-2013, entry version 68.
DE RecName: Full=Glycine dehydrogenase [decarboxylating];
DE EC=1.4.4.2;
DE AltName: Full=Glycine cleavage system P-protein;
DE AltName: Full=Glycine decarboxylase;
GN Name=gcvP; OrderedLocusNames=PSPTO_1276;
OS Pseudomonas syringae pv. tomato (strain DC3000).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=223283;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DC3000;
RX PubMed=12928499; DOI=10.1073/pnas.1731982100;
RA Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T.,
RA Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F.,
RA Madupu R., Daugherty S.C., Brinkac L.M., Beanan M.J., Haft D.H.,
RA Nelson W.C., Davidsen T.M., Zafar N., Zhou L., Liu J., Yuan Q.,
RA Khouri H.M., Fedorova N.B., Tran B., Russell D., Berry K.J.,
RA Utterback T.R., Van Aken S.E., Feldblyum T.V., D'Ascenzo M.,
RA Deng W.-L., Ramos A.R., Alfano J.R., Cartinhour S., Chatterjee A.K.,
RA Delaney T.P., Lazarowitz S.G., Martin G.B., Schneider D.J., Tang X.,
RA Bender C.L., White O., Fraser C.M., Collmer A.;
RT "The complete genome sequence of the Arabidopsis and tomato pathogen
RT Pseudomonas syringae pv. tomato DC3000.";
RL Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003).
CC -!- FUNCTION: The glycine cleavage system catalyzes the degradation of
CC glycine. The P protein binds the alpha-amino group of glycine
CC through its pyridoxal phosphate cofactor; CO(2) is released and
CC the remaining methylamine moiety is then transferred to the
CC lipoamide cofactor of the H protein (By similarity).
CC -!- CATALYTIC ACTIVITY: Glycine + H-protein-lipoyllysine = H-protein-
CC S-aminomethyldihydrolipoyllysine + CO(2).
CC -!- COFACTOR: Pyridoxal phosphate (By similarity).
CC -!- SUBUNIT: The glycine cleavage system is composed of four proteins:
CC P, T, L and H (By similarity).
CC -!- SIMILARITY: Belongs to the GcvP family.
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DR EMBL; AE016853; AAO54801.1; -; Genomic_DNA.
DR RefSeq; NP_791106.1; NC_004578.1.
DR ProteinModelPortal; Q887L5; -.
DR STRING; 223283.PSPTO_1276; -.
DR EnsemblBacteria; AAO54801; AAO54801; PSPTO_1276.
DR GeneID; 1182912; -.
DR KEGG; pst:PSPTO_1276; -.
DR PATRIC; 19993794; VBIPseSyr93040_1298.
DR eggNOG; COG1003; -.
DR HOGENOM; HOG000239369; -.
DR KO; K00281; -.
DR OMA; QTMVCDL; -.
DR ProtClustDB; PRK05367; -.
DR BioCyc; PSYR223283:GJIX-1301-MONOMER; -.
DR GO; GO:0004375; F:glycine dehydrogenase (decarboxylating) activity; IEA:EC.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0019464; P:glycine decarboxylation via glycine cleavage system; IEA:HAMAP.
DR Gene3D; 3.40.640.10; -; 2.
DR HAMAP; MF_00711; GcvP; 1; -.
DR InterPro; IPR020580; GDC-P_N.
DR InterPro; IPR020581; GDC_P.
DR InterPro; IPR003437; GDC_P_homo.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major_sub1.
DR PANTHER; PTHR11773; PTHR11773; 1.
DR Pfam; PF02347; GDC-P; 2.
DR SUPFAM; SSF53383; PyrdxlP-dep_Trfase_major; 2.
DR TIGRFAMs; TIGR00461; gcvP; 1.
PE 3: Inferred from homology;
KW Complete proteome; Oxidoreductase; Pyridoxal phosphate.
FT CHAIN 1 954 Glycine dehydrogenase [decarboxylating].
FT /FTId=PRO_0000166929.
FT MOD_RES 706 706 N6-(pyridoxal phosphate)lysine (By
FT similarity).
SQ SEQUENCE 954 AA; 103604 MW; 503D639E9F6A16A0 CRC64;
MTDRIELTTA NEFIARHIGP RAADELAMLH TLGFDSIEAL SDSVIPESIK GTSVLNLPAG
QSEADALASI KAIASKNQLF KTYIGQGYYN THTPAPILRN LLENPAWYTA YTPYQPEISQ
GRLESLLNFQ TLISDLTGLP IANASLLDEA TAAAEAMTFC KRLSKNKGSQ QFFASSHCHP
QTLDVLRTRA EPLGITVVVA DETELGDVSD YFGALLQYPA SNGDVFDYRE LAERFHGANA
LVAVAADLLA LTLLTPPGEF GADVAIGSAQ RFGVPLGFGG PHAAYFSTRD AFKRDMPGRL
VGVSVDRHGK QALRLAMQTR EQHIRREKAT SNICTAQVLL ANIASMYAVY HGPRGLTQIA
NRVHHLTAIL AEGLSQLGLN AEQAYFFDSL TLHTGGRTAA LHAAARARHI NLREIDDQRL
GLSLDETTSQ SAVEVLWDIF ASTGQTLPDF TALAASVKSR LPAALLRQSA ILSHPVFNRY
HSETELMRYL RKLADKDLAL DRTMIPLGSC TMKLNAASEM IPVTWAEFGN LHPFAPAEQS
AGYQQLTDEL EAMLCAATGY DAISLQPNAG SQGEYAGLLA IRAYHQSRGD EHRDICLIPS
SAHGTNPATA NMAGMRVVVT ACDARGNVDI EDLRAKALQH REQLAAIMIT YPSTHGVFEE
GIREICGIVH DNGGQVYIDG ANMNAMVGLC APGKFGGDVS HLNLHKTFCI PHGGGGPGVG
PIGVKSHLAP FMPGHARMQR KEGAVCAAPF GSASILPITW MYIRMMGGEG LKRASQLAIL
NANYISRRLE EHYPVLYTGT NGLVAHECIL DLRPIKDSSG ISVDDVAKRL IDFGFHAPTM
SFPVAGTLMI EPTESESREE LDRFCDAMIK IREEIRAVED GTLDKDDNPL KNAPHTAAEI
VGQWSHPYSR EQAVYPVDSL IENKYWPPVG RVDNVFGDRN LVCACPSIES YQEA
//