KEGG   Sphingomonas panacis: AWL63_17945
Entry
AWL63_17945       CDS       T04760                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
span  Sphingomonas panacis
Pathway
span03420  Nucleotide excision repair
span03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:span00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AWL63_17945
   03430 Mismatch repair
    AWL63_17945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:span03400]
    AWL63_17945
Enzymes [BR:span01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AWL63_17945
DNA repair and recombination proteins [BR:span03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AWL63_17945
   MMR (mismatch excision repair)
    Other MMR factors
     AWL63_17945
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 PcrA_UvrD_tudor AAA_12 AAA_11
Other DBs
NCBI-ProteinID: AOH85538
UniProt: A0A1B3ZDN6
Position
3986177..3988477
AA seq 766 aa
MNIPAPAPEPAYLKGLNAPQRDAVLTTEGPVLVLAGAGTGKTAALTARLGHLLATRRAYP
SEILSVTFTNKAAREMRERVGRLVGDVVEGMPWLGTFHAIGAKMLRRHAELVGLQSNFSI
LDTDDQLRLLKQLVIAADIDEKRFPARSLAGLIDEWKNKGLVPSDIDAGESERYANGRGG
ELYQQYQTRLAALNACDFGDLLLHMLTILKRDREVLADYQRRFKYIMVDEYQDTNSVQYL
WLRLLAQERKNICCVGDDDQSIYSWRGAQVENILKFEKDFPGAKVIRLEQNYRSTPHILA
AASGVIANNSGRLGKTLWTEEADGDKVSVFGVWDGPEEARRVGEEIEAAQRNGQSLDRIA
ILVRAQHQTREFEDRFIAIGLNYRIIGGFRFYERAEIRDALAYLRVVHQSADDLAFERIV
NVPKRGLGDKAVQKLHMLARAENIPLSVAAARILDTDELTGAARKSLGNFVIDLARWRRM
ANELPHAELARQILDESGYTGALQVEKSVEAAGRLENLTELVRAMEEYESLGAFLEHVSL
VMDNEAQADEAKVTIMTIHAAKGLEYDTVFLVGWEEGLFPSQRAIDEGGNASLEEERRLA
YVAITRARRRAIILHAANRRIYGQWTSSIPSRFVGELPAAHIESENSMSGGESLWRANWS
ERADPFADVARGTGRGPGWQRAAGVKDGGAFTSRTFSREPTRVVEARASAVSLGNKGRSD
LTVGMRVFHQKFGYGAIAEIEGNKLEIDFDEAGRKRVMDTFVTLPA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgaatatccccgcgcccgcccccgaacccgcctatctcaaaggcctcaacgcgccgcag
cgcgatgccgtgctcaccactgaaggccccgttctggtgctcgccggcgcaggcaccggc
aagaccgccgcgctcaccgcccggctcggccacctactcgcgacccgccgcgcctacccg
agcgaaatcctcagcgtcaccttcaccaacaaggccgcgcgcgagatgcgcgagcgcgtc
ggccggctcgtcggcgatgtcgtcgaggggatgccgtggctcggcaccttccacgcgatc
ggcgcgaagatgctgcgccgccatgccgaactggtcgggctgcaatcgaatttctcgatt
ctcgacaccgacgatcagttgcggctcctgaagcagctcgtcatcgccgccgacatcgac
gagaagcgcttccccgcgcgcagcctcgccgggctgatcgacgaatggaagaacaagggc
ctcgtccccagcgatatcgacgcgggcgagagcgaacgctacgccaacgggcgcggcggc
gaactctaccagcaataccagactcgcctcgccgccctgaacgcctgcgatttcggcgat
ctgctgctccacatgctgaccatcctcaagcgcgaccgcgaggtgctcgccgattatcag
cgccgcttcaaatacatcatggtcgacgaatatcaggacaccaacagcgtccagtatctc
tggctccgcctgctcgcgcaggagcgcaagaacatctgctgcgtcggcgacgatgaccag
tcgatctattcgtggcgcggcgcgcaggtcgagaacatcctcaagttcgagaaggatttc
cccggcgccaaggtgatccggctcgaacaaaattaccgatcgaccccgcacatcctcgcc
gccgcgagcggcgtgatcgccaacaattcggggcggctcggcaagaccttgtggaccgag
gaagccgacggcgacaaggtcagcgtgttcggcgtgtgggacggccccgaggaagcccgc
cgcgtcggcgaggagatcgaggcggcgcaacgcaacggccagtcgctcgatcgcatcgcc
atcctcgtccgcgcgcagcatcagacgcgagagttcgaggatcgcttcatcgcgatcggc
ctgaattaccgcatcatcggcggcttccgcttctacgagcgcgccgaaatccgcgacgcg
ctcgcctatctgcgcgtcgtccaccagagcgccgacgatctcgccttcgaacgcatcgtc
aacgtccccaagcgtggcctgggcgacaaggcggtgcagaagctccacatgctcgcgcgg
gccgagaacattccgctgagcgtcgcggcggcgcgtatcctcgacaccgacgagctgacc
ggcgccgcgcgcaagtcactcggcaatttcgtgatcgatctcgcccgctggcggcgcatg
gcgaacgaactgccccacgccgaactcgcccgccagatcctcgacgagagtggctatacc
ggcgcgctccaggtcgagaaatcggtcgaggcggcggggcggctcgaaaacctcaccgaa
ctcgtccgcgctatggaggaatatgaaagcctcggcgcgttcctcgaacacgtcagcctc
gtcatggataacgaggcgcaggccgacgaggccaaggtgacgatcatgacgatccacgcc
gccaagggcctcgaatatgacaccgtcttcctggtcggctgggaagaaggcctgttcccc
tcgcaacgcgcgatcgacgaaggcggcaacgcgtcgctggaggaggaacgccgcctcgcc
tacgtggcgatcacgcgcgcgaggcgccgcgcgatcatcctccacgccgccaaccgccgc
atctacggccaatggaccagcagcatcccaagccgcttcgtcggcgaactcccggccgcg
cacatcgagagcgaaaacagcatgagcggcggcgaaagcctgtggcgcgccaactggtcg
gaacgcgccgacccgttcgccgacgtcgcgcgcggcaccggccgcggccccggctggcaa
cgcgcggccggggtgaaagacggcggcgccttcaccagccgcacgttctcccgcgaacca
acgcgcgtcgtggaagcgcgcgccagtgcggtgagtttggggaacaagggccgcagcgat
ctgacggtggggatgcgcgtgttccaccagaaattcggctacggcgcgatcgccgagatc
gaggggaataagctggaaatcgacttcgacgaggccgggcgcaagcgggtgatggatacg
tttgttacgctgccggcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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