KEGG   Solanum pennellii: 107005113
Entry
107005113         CDS       T04130                                 
Name
(RefSeq) elongation factor-like GTPase 1
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
spen  Solanum pennellii
Pathway
spen03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107005113
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spen03009]
    107005113
Ribosome biogenesis [BR:spen03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    107005113
SSDB
Motif
Pfam: GTP_EFTU EFG_C GTP_EFTU_D2 EFG_III SRPRB MMR_HSR1 EFG_IV
Other DBs
NCBI-GeneID: 107005113
NCBI-ProteinID: XP_015059099
Position
11:complement(64989692..64993138)
AA seq 1024 aa
MGDFEGEKIRNICILAHVDHGKTTLADHLIASSGGGVLHPKQAGKLRFMDYLDEEQRRAI
TMKSSSIGLKYKEHSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWIEKLTPCLVLNKIDRLIVELRLTPLEAYTRLQRIVHEVNSIVSAYKSEKYLSDVDSL
LSAPAGLVEDENPDLELLEEDEEDTFQPQKGNVAFVCALDGWGFSISDFAEFYASKLGAS
SAAMQKALWGPRYYNAKTKMIVGKKGISSGSKARPMFVQFVLEPLWQVYQAAVEEYGDRG
MLEKVIKSFNLSIPPRELQNKDPKFVLQSVMSRWLPLSDTILSMAVKHMPDPVSAQSFRI
SRLLPKRTLLDMGSNPDVLSEAELVRKSVESCDSSPDAPCVVFVSKMFAIPSKMLPRGEI
MDDSGNGDSDECFLAFARIFSGVLHAGQKIFVLTALYDPLKEESMQKHVQEAELQSLYLM
MGQGLKPVASAKAGNVIAIRGLAQHILKSATLSSTLNCWPLSSMTFQVSPMLKVAIEPSD
PADMGALIKGLRLLNRADPFVEVSISARGEHVLAAAGEVHLERCIKDLKERFAKINLEVS
APLVSFKETIEGDSANPLENLKLLSRSSDYLEKETPNGRCVVRVRVMKLPTALTKLLDES
SELLEDIIGGKSLQACRSSETLRGNVVEDENPIEAFKKRLIDAVESDFSTGFADTEKDRI
DKCKKTWQKLLKRIWALGPRQVGPNILLTPDVKGKSADVSILIKGSPYVSKKLGFTDDND
DSSASPESSTSLDPTLLREAENLESSILSGFQLATASGPLCDEPMWGLAFVIEASISPLA
TQPNDSETGPIPQPEQYGLLPGQVMTVVKDACRAAVLQSKPRLVEAMYFCELNTPHDQLG
NTYTVLNRRRAHVVNEEMQEGSSLFTVHAYVPVAESFGFSDELRRKTSGAASALLVLSHW
EALPEDPFFVPRTEEEKEEFGDGASVPQSIARKLMDSVRRKKGLPVEEKVVQFATKQRTL
ARKV
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgggggattttgagggtgaaaagattaggaatatatgtatacttgctcatgttgatcat
gggaagacgacattggctgaccatttgattgcttcatctggtggtggtgtactccatccg
aagcaagcgggtaagcttaggtttatggattatttagatgaggaacagaggagggcgatt
actatgaagagttcttctataggtcttaaatataaggaacattcgattaatcttatagat
tctcctggtcatatggatttctgtagtgaagtttcaactgcagctcgtttgagtgatggc
gcgttggtattagtggatgctgtagaaggtgttcacattcagactcatgcagttctgcgt
caggcgtggattgagaaacttaccccgtgtttggttttgaataagattgataggttgatt
gttgaattgagattgactccccttgaggcgtatactaggttgcagaggattgttcatgag
gttaatagtatagtgagtgcttacaagtctgaaaagtatttgtcggatgttgattctctg
ctctctgctccggctggactagtggaggatgaaaatccagatcttgagttgttagaggag
gatgaagaggatactttccaaccccagaaggggaatgtcgcgtttgtatgtgcactagat
ggatggggctttagtattagtgattttgctgagttttatgcttcgaaactgggtgcaagt
tcggctgccatgcagaaggcattatggggacctcggtattataacgccaagactaagatg
attgtaggtaaaaagggaattagtagtggaagtaaagctaggcccatgtttgtgcaattt
gttcttgagccactttggcaggtttatcaagctgctgtggaagaatatggagataggggg
atgcttgagaaagttataaagtcttttaatttgtctatacctcctcgtgaacttcaaaat
aaggatcctaaatttgtgcttcaatctgttatgagtcgttggcttccattgtccgatacc
atattgtctatggctgtcaaacacatgcctgatcctgtatctgctcagtctttccgtata
tctcggctgcttccaaagagaacactcttagatatgggctcgaaccctgatgtgctttct
gaagccgaacttgtcaggaaatctgtggagtcctgtgattccagccctgatgctccttgt
gttgtttttgtttctaagatgtttgctattccatcaaaaatgcttccgcgtggagagatt
atggatgacagtggaaatggtgactctgatgaatgttttcttgcatttgccaggatcttt
agtggggttcttcatgcaggacagaaaattttcgtacttacagcattgtatgatccactg
aaggaagaatcaatgcagaagcatgtgcaagaagctgagttgcagtctttgtatttgatg
atgggtcaagggttgaaaccagtggcatcagccaaggcgggtaatgtcatagctatccga
gggcttgcccagcatatattgaagagtgcgactctttcatctacgttgaattgttggcct
ttatcaagtatgactttccaagtctcacccatgcttaaagttgcaattgaaccttctgat
cctgctgacatgggtgcacttattaaaggtttgaggcttctaaacagagcggatcctttt
gttgaggtttctatttctgctaggggcgaacatgttcttgctgcagcaggtgaggtgcac
ctggagagatgcattaaagatttaaaggagagatttgctaagataaacttggaagtctct
gcaccccttgtatctttcaaagagaccatcgaaggagatagcgctaatcccttagaaaat
ttgaagctattgagccgcagctctgattatttggagaaagaaactccaaacggaagatgt
gttgttcgtgtgcgtgttatgaagcttccaactgcattgacaaagctgcttgatgaaagt
tctgagttgcttgaagacatcattggaggtaaatctctacaggcttgtagaagctcggaa
actctcagaggtaacgttgtagaagatgagaatccaattgaagcatttaagaaacgccta
atagatgctgtggagagcgacttttctactggatttgctgatacagaaaaggataggatt
gataaatgtaagaaaacatggcaaaaactcttaaaaaggatctgggctttagggcctaga
caggtcggtcccaacattctcctcactccggatgtgaaaggaaagagcgccgacgtttct
attcttataaagggttccccttatgtatcgaaaaagttgggctttacggatgacaatgat
gatagcagcgcatcaccagaatcatcaaccagtttggatccgacccttttacgagaagct
gagaatcttgaaagcagtatattatctggatttcagttagctacagcatctggcccttta
tgtgatgagccaatgtggggtttggcatttgttattgaagcttccatatctccattagct
acgcaaccaaatgatagtgagaccggccctattccacagcctgaacaatatgggctttta
cctggacaggtgatgactgttgttaaggatgcctgcagggctgctgttctccagagtaaa
cctcgacttgttgaagccatgtacttctgtgaactgaacaccccacacgaccagttgggc
aacacttacacagttcttaatcgtaggcgtgctcatgtggtaaacgaagaaatgcaggaa
ggttcttccttgttcactgtacacgcttatgtaccagttgcagaaagctttggattctcc
gatgagttgaggagaaagacttctggagctgcaagtgcactactcgtcctcagccattgg
gaagcccttccagaggatcctttctttgtacctagaaccgaggaggagaaagaagaattc
ggagatggtgctagtgtgccacagagtatagcaagaaaactcatggattctgtaagacga
aagaaaggtcttccagtagaggaaaaagtggtacaattcgcgactaagcagaggacgttg
gctcgcaaggtgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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