KEGG   Solanum pennellii: 107012471
Entry
107012471         CDS       T04130                                 
Name
(RefSeq) uncharacterized protein LOC107012471
  KO
K14315  nucleoporin NDC1
Organism
spen  Solanum pennellii
Pathway
spen03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107012471
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107012471
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107012471
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 107012471
NCBI-ProteinID: XP_015067812
Position
3:64948377..64952353
AA seq 558 aa
MLISIVERSLFRDNDGGTKVVKHRFLGFLIWQALQSTAVFFLSKTLLLSLFTRTPFKPSF
LSIFTFIVFHFSLLIFSTSLFIISSPRPQRAASPLNLLLGTARLILVPISNSQPLLSPDF
RLRARASISFVLFVAVAAVSASLSVITLCLSCNAFDQLKHRRLVIGKLGFWGLQIGLIYG
VHYVYNKRWVLQFPIIQRPPFFSFKMGLPLAVGKALKLSAAGYVLSAILSFVLPYEFKGQ
LPVGNFITEQILFYIGSFVVILCWELCHHLHQVLHTKRSVFAPPKGSAAAETNPSEPLLA
ALEESTPKSLLQYLAYLDLCMVSEGNVDPWRRAAFFEESGETYKRVISVCLTPVEQFTRN
VSEVLESSPVGNSLQLSHQLRSPNEQLADSKVYESFDDFQLLAWCARIVASLTVHSHKED
RFGVAQLSGSNAAVISTLLSSLLAVETLMGKKTNLQSSNTLMDPAGIKWATLNPGRRDSA
AGMAGRRKGAPFYAKAYSMADILKTSIYGIVWAFYDEMSHSAKAGLLEKDWIISSKPLYG
TRELLSQKLRLFLDFQAS
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgcttatatccatagtagaaagatccttattcagagataacgacggcggtactaaagtc
gtcaaacaccgcttcctagggttcttaatctggcaagcgcttcaatccaccgccgtcttc
ttcctctccaaaaccctactcctttctctcttcactcgaacccccttcaaaccctcattt
cttagtatcttcactttcatagttttccacttctcccttctcatcttctctacttccctt
ttcatcatctcttctcctcgccctcaacgcgctgcttcccctctaaatcttctgctcggt
actgctcggctgatacttgttcccatttctaactctcagccgctgctgtcccctgatttt
cggctccgggcgagggcttccattagttttgtgctgtttgtggcggtggctgctgtttca
gcgtctttgtctgtgattaccctctgtttgagctgtaatgctttcgatcaattgaaacac
agacggctggttattgggaaattagggttttggggtttgcagatcggattgatatatgga
gtgcattatgtatataacaagcggtgggttttgcagttcccgatcatccagcgtcctcct
tttttcagttttaagatggggctacctttagctgttgggaaagctttaaagctttctgct
gctggttatgtgctttcagctatcctttcatttgttctaccttatgagtttaagggtcaa
cttccagtaggaaacttcatcactgagcagattctcttctatattggaagttttgtggtg
attctctgctgggaattatgtcatcatttacaccaggtgttacacacaaaacggtccgtc
tttgcccctccaaaaggttctgcagctgctgaaacaaatccaagtgaaccgcttctggcc
gcattggaggagagcacaccaaaatctcttttgcagtatcttgcataccttgacctttgt
atggtatccgaaggtaatgttgatccttggcgccgagctgccttctttgaggaaagtggt
gaaacttacaaaagagtcatttctgtgtgcttgacccctgttgaacaattcacaagaaat
gtgagtgaggttttggaaagctctccagttggtaactccttgcaactttctcaccagttg
cgttctccaaatgaacagcttgccgattcaaaggtttatgaatcatttgatgactttcag
ctactagcttggtgtgctcgcattgtggcttcactgactgtgcattcacacaaggaggac
agatttggtgttgctcaactatcagggagcaatgctgctgttatttcaacattgctatcg
agtttattagctgttgaaactttgatgggcaagaaaaccaacttacaatcgtcaaatact
ttaatggatcctgctggtattaagtgggctacattaaacccaggaaggagagattcagca
gcaggcatggcaggaagaagaaaaggagcccctttttatgcaaaagcatattcaatggct
gatatcctgaagacttccatctatggtattgtctgggctttctacgatgagatgtcacat
agtgccaaggcgggactgcttgagaaagattggatcatcagtagtaagccactgtatgga
actcgtgagctcctttcacagaaactgcgactgttcctggacttccaagctagctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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