KEGG   Sphingobium sp. EP60837: EP837_01166
Entry
EP837_01166       CDS       T04432                                 
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sphb  Sphingobium sp. EP60837
Pathway
sphb03410  Base excision repair
sphb03430  Mismatch repair
sphb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sphb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EP837_01166 (recJ)
   03430 Mismatch repair
    EP837_01166 (recJ)
   03440 Homologous recombination
    EP837_01166 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphb03400]
    EP837_01166 (recJ)
DNA repair and recombination proteins [BR:sphb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     EP837_01166 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     EP837_01166 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      EP837_01166 (recJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: ANI77599
UniProt: A0A173KTZ4
Position
1:complement(1188759..1190525)
AA seq 588 aa
MTVALNVSRSILGQPWRWRGAGADARGPGYLPDDLVTQLLLARGCPREAVEAHRNPTIRH
FMPDPSLFRDMDHAAERLADAVQKGEQVRIFGDYDVDGATSAALLIRLLRDLGLAAQPYI
PDRLMEGYGPSGEALVRLAGEGATLIVTVDCGAQAFEALAMAKAVVVDVVVIDHHKCAAA
LPEAFALVNPNRLDEVEEAAAHGHLAAVGVAFLLGAALIRVLRRRGWFGQRAEPALMELL
DIVALGTVADVAQLKGLNRAFVAQGLKVMAKRRNIGLSALIDASRLSRAPLCHDLGFALG
PRINAGGRVGKADLGVRLLTTEDPLEAAHIAAELDQLNEERRAIEAAVQAEAEELLAAQG
NRAVAVIAGPGWHPGVIGIVAGRIKEKAGRPAIVIAIDEAGTGKGSGRSISGVDLGAAVL
AAKDSGLLVAGGGHAMAAGLTVAADKLDAFADFLDERLASSVARARDDRALLIDAVLAPA
GINPDFVAAIEAGGPYGAGWPAPLVAAGPMRVIKADVVGNGHLRAIMAGEDGRSIKTIAF
RQAETDLGQAILGAPHDRRLWVAGRAKIDDWGSRPAAELHLEDAAWAD
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgactgtcgcgctcaatgtttcccgctcgatccttggacaaccgtggcgctggcgtggg
gcaggggcggacgcgcgtggaccgggctatctgcccgacgatctcgtaacccaactgctt
ctggcccggggctgtccgcgcgaggctgtcgaggcccatcgcaatcccacgatccgccat
ttcatgccggaccccagcctgtttcgcgacatggaccacgctgccgagcgcttggcggac
gccgttcaaaagggcgaacaggtccgcatcttcggcgactatgatgtcgatggcgcgacc
agcgcggccttgctgatccgcctgctgcgtgaccttggccttgcagcgcagccctatatc
cctgatcggctgatggaaggctatggcccctccggcgaagcgttggttcgccttgcaggg
gagggggcgaccctgatcgtcactgttgattgcggcgcgcaggcttttgaagcgctcgcc
atggcgaaggcggtggtggtcgatgtcgtcgtcatcgaccaccacaaatgcgccgccgcc
cttccggaggctttcgccctcgtcaatcccaatcgcctggacgaggtggaggaagcggcc
gcccacggccatcttgcggccgtcggggtcgccttcctactgggcgccgcgttgatccgc
gtcctgcgcaggcggggctggttcggccagcgcgccgagcccgccctcatggaactgctc
gacatcgtggcgctcggcaccgttgccgatgttgcgcagctgaagggcctcaatcgcgcc
tttgtcgcccaagggctgaaggtcatggcgaagcgccgcaatatcggcctctccgccttg
atcgacgccagccgcctcagccgcgcgccgctctgccacgacctgggctttgcacttggc
ccacgcatcaatgcgggcggccgcgttggcaaggcggatctgggagtgcgcctgcttacg
accgaagacccgctggaagccgcgcacatcgctgccgaactcgaccagttgaacgaggag
cgccgcgccattgaagcggctgtccaggctgaggcggaggagttgctagccgcgcagggc
aaccgggccgtcgccgtaatcgctggtcccggctggcaccccggcgtgatcggcatcgtc
gctggccgcatcaaggagaaagccggccgcccggccatcgtcatcgccattgatgaggct
gggacgggtaaggggtctggccgatccatctcaggcgtggatctgggcgcggcggtactg
gcggcgaaggatagcggcttgcttgttgcgggcggtggccatgccatggcggccgggctg
acggtggcagcggacaagctggacgcctttgcggattttctggacgaacggctcgcctcg
tcagtcgcgcgcgcccgtgatgaccgggcgctgctcatcgacgccgtgctggcccccgcg
ggcatcaatccggactttgtcgccgcaatcgaagcgggtggaccctatggagctggctgg
cccgcgccgctcgtcgctgccggacccatgcgcgtgatcaaggccgatgtcgtcggcaac
ggccatttgcgcgcgatcatggcgggtgaggacggtcgctcgatcaagaccatcgccttc
cgccaagctgaaactgaccttggccaggcaatcctcggcgccccccacgatcgcagactc
tgggtcgcaggccgggccaagatcgatgactgggggagccgcccggccgccgaactgcat
ctggaagacgccgcctgggcagattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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