KEGG T05200: HY78

Rhizorhabdus wittichii DC-6: HY78_05905

Entry

HY78_05905        CDS       T05200

Name

(GenBank) chromosome partitioning protein ParB

K03497

ParB family transcriptional regulator, chromosome partitioning protein

Organism

sphd Rhizorhabdus wittichii DC-6

Brite

KEGG Orthology (KO) [BR:sphd00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sphd03000]
    HY78_05905
   03036 Chromosome and associated proteins [BR:sphd03036]
    HY78_05905
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sphd04812]
    HY78_05905
Transcription factors [BR:sphd03000]
Prokaryotic type
  Other transcription factors
   Others
    HY78_05905
Chromosome and associated proteins [BR:sphd03036]
Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    HY78_05905
Cytoskeleton proteins [BR:sphd04812]
Prokaryotic cytoskeleton proteins
  MinD / ParA class of bacterial cytoskeletal proteins
   HY78_05905

SSDB

Motif

Pfam:

ParBc Sigma70_r4 Sigma70_ECF

Other DBs

NCBI-ProteinID:

ARR53012

Position

complement(1230713..1232860)

AA seq 715 aa
MTKTVQIETTAAEPVSGIEIFVPLNKLKKSPKNARKVPHGEAAIEALAASIEHKGLIQNL
VIEPEMKDEKPTGAYFVTAGEGRRLAYLLRAKRRQIRKNHPVRCRLDTENDPSEISLDEN
VTRTPMHPADQFERFRELADGNGWGAEEIGARFGVSGGVVKQRLRLGAVSPKLLQVYRED
GLTLDQLMAFAITEDHARQEQVFENLHHNREPWIIRRDMTANNVPADDRRAVFVGADAYI
EAGGNIIRDLFSEDRGGFFEDAGLLDMLAVEKLREIADGVQAEGWKWVEAHIDYPHAHGM
RRFYPQAVDLSDEDEARLEALSTEHDELAEGYSSYDEMPEDVAKKLEAVSDEIDAISAKR
YAYDANVIAHGGAFVVLHHDGTVRIERGFVRPEDEALADPQPEDEAEAIEPEAVEDEQAE
DSDEEVQDFEDEDEEPGKPISDSLIRDLSAHRTLALRVALGEQPGMALVALTHTLTAQLF
YSYAEAGCLEIRPTVTPLGGHAAGIEDTPLAARASEAHDAWAERMPRDVADLWGFIVALD
DEQRMALLAHCASRTVNALRLPWDRKPRTLQTADRLATALALDMAKDWTPTVDSYLGRVT
KAHILEAVAEGVSEDAARRIADKKKPEMAEAAEQRLVGKGWLPAVLRTPEPEAEPVETED
AEGIAQPSEAEAPDTGAQDGEAVEVEAVEQPTEPEAVDADVEPVDEEDAYSIAAE

NT seq 2148 nt +upstreamnt +downstreamnt
atgaccaagaccgttcaaatcgaaaccaccgctgccgagcctgtgtcgggcatcgagatt
ttcgtgccgctgaacaagctcaagaagtcccccaagaacgcccgcaaggtgccgcatggc
gaggccgccatcgaggcgctggccgcttccatcgagcataagggtctgatccagaacctt
gtgatcgagccggaaatgaaggacgagaagccgaccggcgcctatttcgtcaccgctggc
gaaggtcgcaggctggcctatctgttgcgcgccaagcgcaggcagatcaggaagaaccac
ccggttcgctgccgtctcgacaccgagaacgacccgtccgagatcagtctggacgagaat
gtgacccggaccccgatgcaccccgccgatcagttcgagcggttccgcgagcttgcggac
ggcaacggatggggcgcggaggaaatcggcgcgcggttcggcgtgtcgggcggcgtggtg
aagcagcggcttcgccttggcgctgtcagtccgaagctgttgcaggtctatcgcgaggac
gggctgaccttggatcagcttatggcattcgccatcaccgaagaccacgcccggcaagag
caggtgttcgagaacctgcatcacaaccgggagccgtggatcattcggcgcgacatgacc
gccaacaacgtgcccgccgatgatcgccgtgcggtgttcgtcggggccgatgcctatatc
gaggcgggcggcaacatcatccgcgacctgttcagtgaggatcgaggcggtttcttcgag
gatgcgggcttgctcgacatgcttgccgtcgagaagctgcgcgagatcgcggacggggtg
caggccgaggggtggaagtgggttgaggcccatatcgactatccccatgctcacggtatg
cggcgcttctatccgcaggccgtggacctgtccgacgaggacgaggcccggcttgaggcc
ctgtccaccgagcatgacgagcttgccgaaggctattcgtcctatgacgaaatgcccgag
gacgtggcgaagaagctggaagcggtgtccgatgagatcgacgccatttcggccaagcgt
tacgcctacgatgccaacgtgatcgcgcatggcggagcgttcgtggtgcttcaccatgac
ggcacggtcaggatcgagcgcggtttcgtccgtcccgaggatgaggcgcttgccgatccg
cagcccgaggacgaggccgaagccatcgaaccggaggccgtggaggacgagcaggccgag
gacagcgacgaggaagttcaggatttcgaggatgaggacgaggaaccgggcaagcccatt
tccgacagcctcattcgcgacctgtccgcccaccggacgctggcccttcgcgtggcgctt
ggcgaacagcccggcatggcgttggtagccctgacccacacgcttacggcgcaactgttc
tacagctacgccgaggccggttgccttgaaatccgtccgaccgtgaccccgcttggcggt
catgcggcggggatcgaggatacaccgctggcggcgcgggcgagcgaggcgcatgacgca
tgggccgagcggatgccgcgcgacgtcgcggacctgtggggcttcatcgtcgcactggac
gatgagcagcggatggcgttgctggcgcattgcgcgtcccgcaccgttaacgccctgcgc
ctaccgtgggatcgcaagccccggacgctgcaaacggcggacaggctggcgaccgcgctg
gcgctggacatggcgaaggactggacgccgaccgtggacagctaccttggccgtgtcacc
aaggcgcatatccttgaggccgttgccgaaggggtatcggaggatgcggcccgccgtatt
gcggacaagaagaagccggaaatggccgaagccgccgagcagcgtcttgtcgggaagggc
tggcttcccgctgtgttgcggacgccggagccggaggccgaacccgtcgagacggaggac
gccgaagggatcgcgcagccgtccgaagcggaggcccccgataccggagcgcaggacggc
gaagccgtggaggtcgaggcggtggagcagccgaccgaacccgaagcggtggacgccgac
gttgagccggtggacgaggaagacgcttactcgattgccgccgaatag

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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