KEGG T05200: HY78

Rhizorhabdus wittichii DC-6: HY78_24135

Entry

HY78_24135        CDS       T05200

Name

(GenBank) DNA recombination/repair protein RecA

K03553

recombination protein RecA

Organism

sphd Rhizorhabdus wittichii DC-6

Pathway

sphd03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:sphd00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HY78_24135
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphd03400]
    HY78_24135
DNA repair and recombination proteins [BR:sphd03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HY78_24135
    RecFOR pathway proteins
     HY78_24135
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    HY78_24135

SSDB

Motif

Pfam:

RecA RecA_C Rad51 ATPase AAA_24 ATPase_2 AAA_25 AAA AAA_16 CobU AAA_22

Other DBs

NCBI-ProteinID:

ARR56324

Position

5115869..5116942

AA seq 357 aa
MSAQLKLIGSEREAANMDRQKALEAALAQIDRAFGKGSAMKLGSRETMQVEAISTGSLGL
DIALGIGGLPKGRVVEVFGPESSGKTTLALHAIAEAQKVGGTAAFIDAEHALDPVYAKKL
GVNIDELIVSQPDTGEQALEIADTLVRSNAIDVLVIDSVAALVPRAEIEGEMGDSHVGLQ
ARLMSQALRKITGSISRSKCLVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRR
TGAIKDRDEVVGNATRVKVVKNKVAPPFKQVEFDIMYGEGVSKVGELLDLGVKAGLVEKS
GAWFSYDSIRIGQGRENSKVYLRENPEVAAKLEAAIRGNADGVGEAMMAGPSEDDDI

NT seq 1074 nt +upstreamnt +downstreamnt
atgtcggcgcagttgaagctcatcggatccgaaagggaagcagcgaatatggataggcag
aaggcccttgaagccgcattggcgcagatcgaccgcgccttcggcaagggctcggcgatg
aagctcggcagccgcgagacgatgcaggtcgaggcgatctcgaccgggtcgctcgggctc
gacatcgcgctcggcatcggcggcctgcccaaggggcgcgtcgtcgaggtgttcgggccg
gaaagctcgggcaagaccacgctcgcgctccacgcgatcgccgaggcgcagaaggtgggc
ggcaccgcggcgttcatcgacgccgagcatgcgctcgatccggtctatgccaagaagctc
ggcgtcaatatcgacgagttgatcgtctcgcagcccgacaccggcgagcaggcgctggag
atcgccgacacgctggtccgctcgaacgcgatcgacgtgctggtgatcgactcggtcgcg
gcgctggttccccgcgccgagatcgagggcgagatgggcgacagccatgtcggcctccag
gcccggctgatgagccaggcgctgcgcaagatcaccggctcgatcagccggtcgaagtgc
ctggtcatcttcatcaaccagatccgcatgaagatcggcgtgatgtacggttcgccggag
acgacgaccggcggcaacgcgctgaaattctacgcttcggtccgtctcgacatccgccgt
accggcgcgatcaaggaccgcgatgaggtggtcggcaacgccacccgcgtcaaggtcgtc
aagaacaaggtcgccccgccgttcaagcaggtcgagttcgacatcatgtatggcgagggc
gtgtcgaaggtcggcgaattgctcgacctcggcgtcaaggccggcctcgtcgagaagtcg
ggcgcctggttcagctatgattcgatccgcatcggccagggccgcgagaattcgaaggtc
tatctgcgcgagaatcccgaggtcgccgccaagctcgaagccgcgatccgcggcaatgcc
gacggcgtcggcgaggcgatgatggcgggtccgtccgaggacgacgacatctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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