KEGG   Sphingomonas hengshuiensis: TS85_18440
Entry
TS85_18440        CDS       T03848                                 
Name
(GenBank) DNA polymerase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
sphi  Sphingomonas hengshuiensis
Pathway
sphi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sphi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TS85_18440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphi03400]
    TS85_18440
Enzymes [BR:sphi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     TS85_18440
DNA repair and recombination proteins [BR:sphi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     TS85_18440
SSDB
Motif
Pfam: DUF4130 UDG
Other DBs
NCBI-ProteinID: AJP73350
UniProt: A0A7U4JAN8
Position
4074805..4076184
AA seq 459 aa
MRRVTLAAEDDFAGWRDAARALAQAGVAPSDVVWQVGEQPGDLFSAPELPGGGTKGFTVQ
RGFLELAQSALLHADPQRFAWLYSLLVGLIDQPRRIDDRADPLVRRIEDMAKAVRRDIHK
MRAFVRFREVDDGGTPRYVAWFEPEHHIVRANARFFVDRFAAMRWSILTPELSLHWDGAT
LREGPPARREDAPGDDPVEAMWKTYYASTFNPARLKVGAMRKEMPRKYWHNMPETALVKE
LVAGARQRETAMVANARDALGGNSGDAWEALREEARGCTRCHLHAHATQTVFGEGPVDAR
MMVIGEQPGDQEDLAGHPFVGPAGQMFDRAIAAAGIDRATLYVTNAVKHFKFEPRGKRRI
HAKPDAGEISACRWWYEQERLLVRPAVTLALGATAARQMLGKVVTIGRERGRAIELAEGG
IGWVTIHPSFLLRMPDKARVEDEFAAFVQDLRGAAALAG
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgcggcgagtgaccctcgccgccgaggacgacttcgccggatggcgcgacgctgcgcgg
gcgctggcccaggcgggcgtcgcgccgtctgacgtggtctggcaggtgggcgaacagccg
ggcgatcttttcagcgcgcccgaattgcccggcggcggaacgaaaggcttcaccgtccag
cgcgggtttctggagcttgcccagtcggcgctgctgcacgccgatccgcagcgcttcgca
tggctctactcgctgctcgtcggcctgatcgaccagccgcgccgcatcgacgatcgcgcc
gatccgctggtgcgccgcatcgaggacatggccaaggcggtccgccgcgacatccacaag
atgcgcgcgttcgtccgctttcgtgaagtcgatgacggcggcaccccgcgctatgtcgcc
tggttcgagcccgagcatcatatcgtccgcgccaatgcccgcttcttcgtcgatcgcttc
gcggcgatgcgctggtcgatccttacccccgaactgtcgctgcactgggacggcgcgacg
ctgcgcgagggcccgcccgcgcggcgcgaggacgcgcccggcgacgatccggtcgaggcg
atgtggaagacctattacgcctccaccttcaatcccgcgcggctcaaggtgggcgcgatg
cggaaggagatgccgcgcaaatactggcacaacatgcccgaaaccgcgttggtcaaggaa
ctggtggcgggcgcgcgccagcgggaaacggcgatggtggcgaacgcacgcgatgcactc
ggcggcaacagcggcgacgcatgggaagcgctgcgcgaagaggcgcgcggctgtacccgc
tgccatttgcacgcccatgcgacgcagacggtgttcggcgaaggcccggtcgatgcgcgg
atgatggtgatcggcgagcagcccggcgaccaggaggacctggccgggcacccctttgtc
ggcccggcggggcagatgttcgaccgcgccatcgcggcggcagggatcgaccgcgcgacg
ctctacgtcaccaatgcggtcaagcacttcaagttcgagccgcgcggcaagcgccgcatc
catgcgaagcccgacgcgggcgagatcagcgcgtgtcgctggtggtacgagcaggagcgg
ctgctcgtccggcccgcggtcacgctcgcgctgggcgccaccgcggcgcggcagatgctg
ggcaaggtcgtgacgatcggtcgcgaacgtggccgcgcgatcgagctggccgagggcggg
atcggctgggtgacgatccatccgagcttcctgctgcggatgcccgacaaggcgcgcgtg
gaggacgagttcgccgcgttcgtccaggatttgcgcggcgcggcggcgctcgcgggttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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