KEGG   Sphingorhabdus lutea: LPB140_01415
Entry
LPB140_01415      CDS       T04602                                 
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
sphl  Sphingorhabdus lutea
Pathway
sphl00550  Peptidoglycan biosynthesis
sphl01100  Metabolic pathways
sphl01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:sphl00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    LPB140_01415
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    LPB140_01415
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sphl01011]
    LPB140_01415
Enzymes [BR:sphl01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     LPB140_01415
Peptidoglycan biosynthesis and degradation proteins [BR:sphl01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   LPB140_01415
SSDB
Motif
Pfam: Transpeptidase PBP_dimer HTH_Tnp_ISL3
Other DBs
NCBI-ProteinID: APG63458
UniProt: A0A1L3JE87
Position
285760..287775
AA seq 671 aa
MAQQNFAFSRRTLFVGAVQGGFGVLLSARMAYIAVAENEKYRLASESNRVNLTFIPPRRG
WFVDRFGKPIATNRTDFRVDVIPDRMVDKDATIKSLAELLSLDTETVERIKKEVKHSSGF
QPVQVASGMSFDDFAKISVRAPDLPGVSPRQGFSRYYPSGPAVGHLIGYVGGASAEEYKA
LKNPLLITPGFKIGKDGLEKQFEKTLEGSPGAKRVEVTARGKIVRELTTRGDVPGKPVQL
TIDIDLHNYAARRLGLESGSVVVMDCLTGDILTMASMPSFDPNSFSDGIGVSEYKWLAQD
DHKPLRNKTLSGLYPPGSTVKPMVAMAFLEAGLDPEASVGCSGGLRVGNRVFRCWNRRGH
GSVNMRRAISQSCDVYFYHFAQKIGMDPIALMAEKLGMGQKFDLPVASQSYGTVPNPAWM
LKKHERKWAAFDTVNSTIGQGYMLANPLQLAVMASRLATGKNLMPHLLLNKKAKPPSELG
FTEEHINYVRQAMSDVVNGDGTAGRARLPIADVKLAGKTGTAQVVSLDYGRGGSDVSWKY
RDHGLFICFAPFDNPRYAASVVIEHGGGSGSAYPIARDVLTFLYDREAAMKTLESMEAGW
GGTPEQRMARNLAAFRVQNGVDAKPKPTNEPPSANGAANATASPSPATGQSPSTGQVPPT
GQVPTNDAGDE
NT seq 2016 nt   +upstreamnt  +downstreamnt
attgcgcagcaaaatttcgccttttcgcgccgcaccttatttgtcggtgcggttcagggc
ggctttggcgtgctgttaagcgcgcgcatggcatatattgcggtggcggaaaatgaaaaa
taccgacttgcctctgaaagcaatcgtgtcaatttaaccttcatccccccgcgcaggggg
tggtttgtcgatcgatttggcaaacccattgccaccaaccgcaccgattttcgtgtcgat
gttattcccgatcgcatggtggataaggacgcaacgattaaatcgcttgccgaattatta
agtttggacaccgaaacggtcgaacggattaaaaaagaggtcaaacattccagcggattt
caacccgtgcaagtcgcatcggggatgagttttgacgattttgcaaaaataagcgtgcgt
gcgcccgatttacccggtgtttcgcccagacagggtttctcccgctattatcccagcggg
cccgccgtcggccatttaatcggatatgtgggcggtgcatcggccgaggaatataaggcg
ctgaaaaatccattattgattaccccgggtttcaaaatcggcaaagatggattggaaaag
caatttgaaaaaacattggaaggatcgcccggcgcaaaacgggtggaggtaaccgcaagg
ggcaaaatcgtccgcgaattaaccacaaggggcgatgtgccgggcaaaccagtgcaattg
accattgatattgaccttcataattatgccgcccgccgattggggttggaatcaggctct
gtggttgtcatggattgcttaaccggtgatattttaaccatggcgtccatgccatcattt
gacccgaacagcttttccgacggcattggtgtgtcggaatataaatggctggctcaagat
gaccataaaccgctgcgcaataaaacattaagcggactttacccccccggatcgacggtg
aaacccatggtcgccatggcatttttggaggcggggcttgacccagaggcaagcgttggg
tgcagtggcggcctgcgtgtgggaaaccgtgtatttcgttgttggaacaggcgcggccac
ggcagtgtaaatatgcgcagggccatttcacaaagctgtgatgtgtatttttatcatttt
gcccaaaaaatcggcatggaccccattgcgttaatggccgaaaaactgggtatggggcag
aaatttgacctgcccgtggccagccaatcatatggcactgtgccgaatccggcatggatg
cttaaaaaacatgaacgcaaatgggcggcatttgacacggtaaattccaccattggacag
ggatatatgctggccaatccattgcaattggcggtcatggcatcgcgtttggcaacgggc
aaaaatttaatgccgcatttattgttaaataaaaaagcaaagcccccttccgaacttggc
tttaccgaagaacatataaattatgtgcgccaagcgatgagcgatgtggtcaatggtgat
ggaacagctggccgggccagattaccaattgccgatgttaaattggcaggaaaaaccggc
actgcacaggttgtaagcttggattatgggcgcgggggcagcgatgtgtcgtggaaatat
cgcgatcatggcctgttcatttgtttcgcgccatttgacaatccgcgctatgccgcatct
gtggttattgaacatggcggcggttcaggttcggcctatcccattgcgcgcgatgttttg
acatttttatacgaccgagaagccgcaatgaaaacattggaatcaatggaggcggggtgg
ggcggcacgccggaacagcgaatggcccgtaatttggccgcatttcgcgtgcaaaatggc
gtggatgcaaagcccaaaccgacaaatgagccgccttctgccaatggcgctgcaaatgca
acggcttccccttcaccggccacggggcaatcaccgtccacagggcaggtaccgcctaca
gggcaagtgccaaccaatgatgcgggggatgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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