KEGG   Sphingorhabdus lutea: LPB140_08360
Entry
LPB140_08360      CDS       T04602                                 
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
sphl  Sphingorhabdus lutea
Pathway
sphl00970  Aminoacyl-tRNA biosynthesis
sphl01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sphl00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    LPB140_08360 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:sphl03029]
    LPB140_08360 (gatB)
Enzymes [BR:sphl01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     LPB140_08360 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     LPB140_08360 (gatB)
Mitochondrial biogenesis [BR:sphl03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    LPB140_08360 (gatB)
SSDB
Motif
Pfam: GatB_N GatB_Yqey
Other DBs
NCBI-ProteinID: APG62798
UniProt: A0A1L3JCE1
Position
complement(1769238..1770713)
AA seq 491 aa
MTESTYRVHGATGEWEVVIGLEVHAQISTQSKLFSGASTEFGAEPNTQVSLIDAAMPGML
PVPNRECMRQAVRTGMALGAEINKYSRFDRKNYFYADLPQGYQISQLYHPIVGEGEIEVT
LDEKDPNSPTKKIGVERIHVEQDAGKLMHDQHPTMSYVDLNRCGVALMEIVSKPDMRSPA
EAGAYVKKLRSILRYVGSCDGNMEQGSMRADVNVSVRKPGEEFGTRTETKNVNSIRFLMQ
VVEIEARRQVDLIEDGGEVVQETRLFDPNKMETRSMRSKEDAHDYRYFPDPDLLPVILDD
AFLDECRASLPELPDAKRARYENELGLSAYNAAVLTAEAETAAWFEDMMAAGADAKAASN
WLMSELFGALNKMGKGLDESPVSAAQAAELLGLIKDGTISGKIAKDVFEIMLETGDGATK
IVEDRGLKQESDTGAIEAEIVKIVEANQDKVAEYKSGKDRLLGFFVGQTMKAMQGKANPQ
VVNELLKKYLS
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgacagaatcaacatatcgcgttcatggcgcaacgggcgaatgggaagtggttatcggg
ctagaggttcatgcccaaatatccactcaatcaaagctgttttccggcgcatccaccgaa
tttggagcagaaccaaatacacaggttagcttaatcgacgcggcaatgcccggaatgctt
cctgtgccaaatcgtgaatgtatgcgccaagcggttcgcacgggcatggcattgggcgct
gaaattaacaaatattcgcgttttgatcggaaaaattatttttatgccgatttgccgcag
ggatatcaaatctctcaactttatcatcccattgtgggggaaggtgagattgaggttact
ttggatgaaaaagaccccaatagcccaaccaaaaaaattggcgtggagcgtatccatgtg
gagcaagatgccggcaagttaatgcatgatcagcatcccacgatgagctatgttgattta
aaccgttgcggtgtggcgttgatggaaattgtgtcaaagccggatatgcggtcaccggct
gaggctggggcttatgtcaaaaaattgcgctctattcttcgctatgtcggcagttgtgac
ggcaatatggaacaaggatctatgcgggccgacgtcaatgtatctgtgcgtaaaccgggc
gaggagtttggcacacggaccgagacaaaaaatgtgaattccatccgttttttgatgcag
gttgtggagattgaagcacgccgtcaggttgatttgattgaggatggcggcgaagtggtt
caagaaacccgcctgtttgaccccaataaaatggaaacacggtcgatgcggtcaaaggaa
gatgcgcatgattatcgttattttcccgatcctgatttgctacccgttattttggacgat
gcatttttggatgaatgccgcgcatcattgccagagcttcccgatgcaaagcgggctcgt
tatgaaaatgagctcggccttagcgcatataatgccgccgtcttaaccgcagaggcggaa
accgcagcatggtttgaagatatgatggcggcgggcgcagatgcaaaggccgcgtccaat
tggttaatgtcggaattattcggtgcgctgaataaaatgggcaaaggattggacgaaagt
cctgtttccgcggcacaggctgctgaattactcggccttattaaagatggcacgatttcg
ggtaaaatcgccaaggatgtttttgaaatcatgcttgaaaccggcgatggcgcaacaaaa
attgtggaagatcgcgggttaaaacaggaatctgacactggcgcgattgaggcggaaatt
gtcaaaattgttgaggcaaatcaagataaggtcgccgaatataaatcgggcaaagaccgt
ttgcttggtttctttgtgggccagacaatgaaggcaatgcagggcaaggcaaatccacag
gttgtgaatgagcttttgaaaaaatatttaagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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