KEGG   Sphingorhabdus lutea: LPB140_09355
Entry
LPB140_09355      CDS       T04602                                 
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
  KO
K00282  glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
Organism
sphl  Sphingorhabdus lutea
Pathway
sphl00260  Glycine, serine and threonine metabolism
sphl00630  Glyoxylate and dicarboxylate metabolism
sphl00785  Lipoic acid metabolism
sphl01100  Metabolic pathways
sphl01110  Biosynthesis of secondary metabolites
sphl01200  Carbon metabolism
Module
sphl_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sphl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    LPB140_09355
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LPB140_09355
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LPB140_09355
Enzymes [BR:sphl01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     LPB140_09355
SSDB
Motif
Pfam: GDC-P Aminotran_5 Aminotran_1_2 Cys_Met_Meta_PP
Other DBs
NCBI-ProteinID: APG62962
UniProt: A0A1L3JCW9
Position
complement(1972823..1974181)
AA seq 452 aa
MRYLPLNHDDRRAMLNEIGVNSIDDLFIDVPKEAQLSGAIEGLNDHISEMAVERHFHGLA
NKNMVAGQGPFFLGAGAYRHHVPASVDHIIQRGEFLTAYTPYQPEIAQGTLQMLFEFQTQ
VARLFGTDVANASMYDGSTACWEAISMAGRITKRKNVILSGGLHPHYVSVASTMARFTKD
ILDIGMPDENGDADMARLLSSVNKETSAVVVQYPDIVGNVQDLRALSASCAENGALLIVV
VTEPVALGAVTSPGEMGADIVVGEGQSIGVGLQFGGPYVGLFGCKSKYVRQMPGRLCGET
VDAEGKRGFVLTLSTREQHIRRDKATSNICTNSGLCALAFSIHMTLLGEKGLRHLAMLNH
QKAVSLADKLHALDGVEVLTKQFFNEFAVKLNKPSRAVLHELAEQGILGGVSMERLYPGK
DALENIMLVAVTETSTDEDMTRFVSVLKELVA
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgcgttacctgccattaaatcatgatgatcgccgcgcgatgttgaacgaaatcggggtc
aatagcattgatgatttgttcattgatgtaccaaaagaggcccagctgagcggggcaatt
gaggggcttaacgatcatattagtgaaatggcggtggagcggcattttcacggtcttgcc
aataaaaatatggtggcggggcaggggcctttcttccttggcgcgggggcatatcgccat
catgtgccggcatcggttgaccatattatccaacgcggtgaatttttaaccgcctataca
ccctatcaacccgaaattgcacagggcactttgcaaatgttgtttgaatttcaaacacag
gttgcacgccttttcggaacagatgtcgccaatgcttccatgtatgatggttcgaccgcc
tgttgggaggcgattagcatggcagggcgcataacaaagcgcaaaaatgttattttatcg
ggggggctgcacccccattatgtttccgtggcctctacaatggcgcgttttaccaaagat
attttggacattggcatgccagatgaaaatggcgatgcggatatggcgcgtttattatca
tcggtgaataaagaaaccagcgcggtggtggtgcaatatcccgatattgttggcaatgtg
caggatttacgagcgttgagcgccagctgcgcggaaaatggcgcattattgattgttgtg
gtgaccgagcctgtggcgcttggcgcggtgacatcgccgggtgaaatgggcgcggatatt
gtggtgggtgaggggcaatccattggggttggcctgcaatttggtgggccatatgttggc
ttatttggttgcaaatcaaaatatgtgcggcaaatgccgggccgtttatgcggcgaaacc
gtggatgcagagggtaagcgtggatttgtgttaacgctttccacgcgtgaacaacatatt
cgccgcgacaaggccacttccaatatctgtaccaatagcgggctgtgcgccctggcgttc
agcatccatatgacattattgggtgaaaagggcctgcgccatttggcgatgttaaaccat
caaaaggcggtgtcattggccgataaattacatgctttagatggtgttgaagtgcttaca
aagcaatttttcaacgaatttgcggttaagttaaacaagccatcacgcgcggttttgcat
gaattggccgagcaaggaatattgggcggtgtttcaatggagcggctatatcccggtaaa
gatgcgttggaaaatatcatgttggttgcggtaaccgaaacatcaactgatgaggatatg
acgcgatttgtttccgttttgaaggagttagtggcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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