KEGG   Sphingomonas sp. MM-1: G432_03565
Entry
G432_03565        CDS       T02498                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
sphm  Sphingomonas sp. MM-1
Brite
KEGG Orthology (KO) [BR:sphm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sphm03019]
    G432_03565
   03009 Ribosome biogenesis [BR:sphm03009]
    G432_03565
   03036 Chromosome and associated proteins [BR:sphm03036]
    G432_03565
Enzymes [BR:sphm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     G432_03565
Messenger RNA biogenesis [BR:sphm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     G432_03565
Ribosome biogenesis [BR:sphm03009]
 Eukaryotic type
  90S particles
   RNase
    G432_03565
 Prokaryotic type
  rRNA processing factors
   G432_03565
Chromosome and associated proteins [BR:sphm03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     G432_03565
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: AGH48440
UniProt: M4RXJ0
Position
748892..749566
AA seq 224 aa
MNADAFPEWITRTLGHAPRDVALFQRALTHGSHSGASYERLEFLGDRVLGLIAAAWLYER
FPDEPEGALSRRINALVSRETCAEVGRALDVPSWLRLGKQARDDGATGSDNVVGDAVEAL
IGALYLEAGHDAATAFVRRAWAPFVDGQRAAPRHPKSALQEWAAAHRCRPPVYTLAGRSG
PHHAPRFTVTVELPGRADAQASAEGASKQEAETAAAKALLEKLS
NT seq 675 nt   +upstreamnt  +downstreamnt
atgaacgccgatgccttccccgaatggatcacccgcacgctgggccatgccccgcgcgac
gtcgccctgttccagcgcgcgctgacccatggcagccacagcggcgccagctatgagcgt
ctggaattcctcggcgatcgcgtcctcggcctgatcgccgccgcatggctctacgaacgt
ttccccgacgaacccgaaggcgccctatcccgccggatcaacgcgctcgtcagccgcgaa
acctgcgccgaggtcggccgcgcgctcgacgtgcccagttggctgcgcctcggcaagcag
gcgcgcgacgatggcgccaccggcagcgacaatgtggtgggcgatgcggtggaggcgctg
atcggcgcgctctatctggaagccgggcacgatgccgccaccgccttcgtccgccgcgcc
tgggcgcccttcgtcgacggccagcgcgccgcgccgcgccaccccaagtccgcgctgcag
gaatgggcggccgcccatcgctgccgcccgcccgtctacacgctggccgggcgttccggc
ccgcaccacgccccccgcttcaccgtgacggtcgagcttcccggccgcgccgatgcgcag
gccagcgccgaaggcgcgtccaagcaggaagccgaaaccgccgccgccaaggcccttctg
gagaaattgtcatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system