KEGG   Sphingomonas sp. MM-1: G432_05335Help
Entry
G432_05335        CDS       T02498                                 

Definition
(RefSeq) ATP-dependent DNA ligase (EC:6.5.1.1)
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
sphm  Sphingomonas sp. MM-1
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:sphm00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    G432_05335
   03410 Base excision repair
    G432_05335
   03420 Nucleotide excision repair
    G432_05335
   03430 Mismatch repair
    G432_05335
Enzymes [BR:sphm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     G432_05335
    6.5.1.6  DNA ligase (ATP or NAD+)
     G432_05335
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     G432_05335
DNA replication proteins [BR:sphm03032]
 Prokaryotic Type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    Other elongation factors
     G432_05335
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1093524..1095116
Genome map
AA seq 530 aa AA seqDB search
MREFSQLLDGLVYTRSRNGKLRLIADYLRRTPDPDRGWALAALTGGLDLPAVKPAAIRAI
VEERVDPVLLGLSYDYVGDFAETVALIWPKPADQPEEVDDGSLSLAAAVDRLSTLGRSEA
PRELAAMLDRLDASGRFALIKLATGGLRVGISARLAKTAFAQAFGLDVDHVEEVWHGLAP
PYGALFAWGAGGARPEPGDMPVFRPFMLAHPLEDMRVDLAEYAAEWKWDGIRVQIVHAGG
ETRLYSRAGDDISRSFPDVAAAFATPGVVDGELLVKGVAQRGEAASFNALQQRLGRKAVS
ARMLADYPAFVRLYDILFDGAADMRALPWSERRIRLEGFAAALDPARFDLSEIIPAADFA
ALEDIRAGARDAAIEGVMLKRRDSPYVAGRRTGLWYKWKRDPLTADCVMMYAQRGHGKRS
SFYSDYTFGCWTGDPATGGELLPVGKAYSGFTDEELAWLDRFVRNHSVARFGPVREVEKT
LVLEVAFDSIHESRRHKSGLAMRFPRIARIRHDKPAAEADRIETLRRMIV
NT seq 1593 nt NT seq  +upstreamnt  +downstreamnt
atgcgtgaattctcccagctgctcgacgggcttgtctacacacggtcgcgcaatggcaag
ctccggctgatcgccgattatctgcgccgcacgcccgatcccgatcgcggctgggcgctg
gcggcgctcaccggcgggctcgacctgccggcggtgaagcccgccgcgatccgcgccatc
gtcgaggaacgggtcgatcccgtgctgctcggcctcagctacgactatgtcggcgatttc
gccgaaaccgtggcgctgatctggcccaagccggcggaccagcccgaggaggtggacgat
ggcagcctatcgcttgccgccgcggtcgatcgcctctccacgctcggccggtcggaggcg
ccgcgcgagctggccgcgatgctcgacaggctcgacgccagcggccgcttcgcgctgata
aagctggcgacggggggcctgcgcgtcggcatctccgcccgcctcgccaagacggccttc
gcccaggcgttcggacttgacgtcgatcatgtcgaggaggtgtggcacggcctcgccccg
ccttatggcgccctgttcgcctggggcgcgggcggcgcccgcccggagcccggcgacatg
cccgtcttccgcccgttcatgctggcccatccgctggaggatatgcgcgtcgacctcgcc
gaatatgccgccgaatggaaatgggacggcatccgcgtccagatcgtccatgccggcggc
gagacccggctttacagccgcgcgggcgacgatatcagccgcagcttccccgatgtcgcc
gccgccttcgccacgcccggcgtggtcgacggcgaattgctggtgaagggcgtggcccag
cgcggcgaggcggcgagcttcaacgcgctccagcagcggctggggcgcaaggcggtgtcg
gcgcggatgctggccgattatcccgccttcgtccgcctctacgacatcctgttcgatggc
gcggcggacatgcgcgcgctgccctggtccgaacggcgcatccggctggaaggcttcgcc
gccgccctcgatcccgcccgcttcgacctatccgaaatcatccccgccgccgacttcgcg
gcgctggaggacatacgcgccggtgcgcgcgacgccgcgatcgaaggggtgatgctgaag
cggcgggacagcccctatgtcgccgggcggcgcacgggcttatggtataaatggaaacgc
gatccgctgaccgccgattgcgtgatgatgtatgcccagcgcggccacggcaaacgctcc
agcttctattcggactatacgttcggctgctggaccggcgatcccgcgacgggcggcgag
ctgctgccggtgggcaaggcctattcgggcttcacggacgaggaactggcttggctcgac
cgcttcgtccgcaaccacagcgtcgcgcgcttcggcccggtgcgggaggtggaaaagacg
ctggtgctggaggtcgcgttcgattcgatccacgaatccagacggcacaagtcagggctg
gccatgcgcttcccgcgcatcgcccgcatccggcacgacaagccggcggccgaggcggac
aggatcgaaaccctccgccggatgatcgtctag

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