KEGG   Sphingomonas sp. MM-1: G432_05335Help
Entry
G432_05335        CDS       T02498                                 

Definition
ATP-dependent DNA ligase (EC:6.5.1.1)
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
sphm  Sphingomonas sp. MM-1
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sphm00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    G432_05335
   03420 Nucleotide excision repair
    G432_05335
   03430 Mismatch repair
    G432_05335
   03450 Non-homologous end-joining
    G432_05335
Enzymes [BR:sphm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     G432_05335
DNA repair and recombination proteins [BR:sphm03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      G432_05335
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1093524..1095116
Genome map
AA seq 530 aa AA seqDB search
MREFSQLLDGLVYTRSRNGKLRLIADYLRRTPDPDRGWALAALTGGLDLPAVKPAAIRAI
VEERVDPVLLGLSYDYVGDFAETVALIWPKPADQPEEVDDGSLSLAAAVDRLSTLGRSEA
PRELAAMLDRLDASGRFALIKLATGGLRVGISARLAKTAFAQAFGLDVDHVEEVWHGLAP
PYGALFAWGAGGARPEPGDMPVFRPFMLAHPLEDMRVDLAEYAAEWKWDGIRVQIVHAGG
ETRLYSRAGDDISRSFPDVAAAFATPGVVDGELLVKGVAQRGEAASFNALQQRLGRKAVS
ARMLADYPAFVRLYDILFDGAADMRALPWSERRIRLEGFAAALDPARFDLSEIIPAADFA
ALEDIRAGARDAAIEGVMLKRRDSPYVAGRRTGLWYKWKRDPLTADCVMMYAQRGHGKRS
SFYSDYTFGCWTGDPATGGELLPVGKAYSGFTDEELAWLDRFVRNHSVARFGPVREVEKT
LVLEVAFDSIHESRRHKSGLAMRFPRIARIRHDKPAAEADRIETLRRMIV
NT seq 1593 nt NT seq  +upstreamnt  +downstreamnt
atgcgtgaattctcccagctgctcgacgggcttgtctacacacggtcgcgcaatggcaag
ctccggctgatcgccgattatctgcgccgcacgcccgatcccgatcgcggctgggcgctg
gcggcgctcaccggcgggctcgacctgccggcggtgaagcccgccgcgatccgcgccatc
gtcgaggaacgggtcgatcccgtgctgctcggcctcagctacgactatgtcggcgatttc
gccgaaaccgtggcgctgatctggcccaagccggcggaccagcccgaggaggtggacgat
ggcagcctatcgcttgccgccgcggtcgatcgcctctccacgctcggccggtcggaggcg
ccgcgcgagctggccgcgatgctcgacaggctcgacgccagcggccgcttcgcgctgata
aagctggcgacggggggcctgcgcgtcggcatctccgcccgcctcgccaagacggccttc
gcccaggcgttcggacttgacgtcgatcatgtcgaggaggtgtggcacggcctcgccccg
ccttatggcgccctgttcgcctggggcgcgggcggcgcccgcccggagcccggcgacatg
cccgtcttccgcccgttcatgctggcccatccgctggaggatatgcgcgtcgacctcgcc
gaatatgccgccgaatggaaatgggacggcatccgcgtccagatcgtccatgccggcggc
gagacccggctttacagccgcgcgggcgacgatatcagccgcagcttccccgatgtcgcc
gccgccttcgccacgcccggcgtggtcgacggcgaattgctggtgaagggcgtggcccag
cgcggcgaggcggcgagcttcaacgcgctccagcagcggctggggcgcaaggcggtgtcg
gcgcggatgctggccgattatcccgccttcgtccgcctctacgacatcctgttcgatggc
gcggcggacatgcgcgcgctgccctggtccgaacggcgcatccggctggaaggcttcgcc
gccgccctcgatcccgcccgcttcgacctatccgaaatcatccccgccgccgacttcgcg
gcgctggaggacatacgcgccggtgcgcgcgacgccgcgatcgaaggggtgatgctgaag
cggcgggacagcccctatgtcgccgggcggcgcacgggcttatggtataaatggaaacgc
gatccgctgaccgccgattgcgtgatgatgtatgcccagcgcggccacggcaaacgctcc
agcttctattcggactatacgttcggctgctggaccggcgatcccgcgacgggcggcgag
ctgctgccggtgggcaaggcctattcgggcttcacggacgaggaactggcttggctcgac
cgcttcgtccgcaaccacagcgtcgcgcgcttcggcccggtgcgggaggtggaaaagacg
ctggtgctggaggtcgcgttcgattcgatccacgaatccagacggcacaagtcagggctg
gccatgcgcttcccgcgcatcgcccgcatccggcacgacaagccggcggccgaggcggac
aggatcgaaaccctccgccggatgatcgtctag

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