KEGG T04670: BV902

Sphingobacterium sp. B29: BV902_06910

Entry

BV902_06910       CDS       T04670

Name

(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

sphn Sphingobacterium sp. B29

Brite

KEGG Orthology (KO) [BR:sphn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphn03032]
    BV902_06910
   03400 DNA repair and recombination proteins [BR:sphn03400]
    BV902_06910
Enzymes [BR:sphn01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BV902_06910
DNA replication proteins [BR:sphn03032]
Prokaryotic type
  DNA Topoisomerases
   BV902_06910
DNA repair and recombination proteins [BR:sphn03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BV902_06910

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c Toprim_4 HATPase_c_3 GyrB_hook

Other DBs

NCBI-ProteinID:

APU96102

Position

1653661..1655619

AA seq 652 aa
MSEENKNASTYSADNIQVLEGLEAVRKRPSMYIGDTGVKGLHHLVYEVVDNSIDEAVAGY
CTDIFVTIHKDNSISVRDNGRGIPTGINKKENKSALELVMTVLHAGGKFDKDTYKVSGGL
HGVGVSCVNALSTLLKAEVHRDGKIYQQEYQIGKPLYDVKEVGVSDKTGTIVTFHPDATI
FTQTTVYNYDTLANRLRELAFLNKGVSLTLNDEREANEDGSEKKETFYSEGGLKEFVKFL
DGNRQSLIPEPIYVEGVKQGIPVELALQYNDTYSENVHSYVNNINTIEGGSHVAGFRRGL
TRTLKAYADKSGLLKNLKVEITGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVMGAV
DVAVGEILGVYLEENPREAKSIVQKVVIAAQARAAARKARDLVQRKTVMGGSGLPGKLAD
CQDNDPTKCEIYFVEGDSAGGTAKSGRDRKHQAIMPLRGKILNVEKAMEHKIYENEEIKN
MFTALGVSVGTAEDAKALNIEKLRYHRIIIMTDADVDGSHITTLILTFYFRYMKELIERG
YVYIATPPLYLVKKGKEHEYAWNEDQRINAIQRLKGSGKEDSVHVQRYKGLGEMNAEQLW
DTTMNPETRTLRQVTIENAAECDRIFSMLMGDEVAPRREFIEKNARYAKIDI

NT seq 1959 nt +upstreamnt +downstreamnt
atgagcgaagaaaataagaatgcatccacctattcggccgataatattcaggtattagag
ggtttagaggcggttcgtaagcgtccatccatgtatatcggtgacaccggtgtaaaagga
ttgcaccatttggtatacgaggttgttgataattcaatcgatgaagctgtagcaggatat
tgtacagatatctttgttactatccataaagataactcgatttctgtccgggataacggt
cggggtattcctacagggatcaacaaaaaagagaataaatcagccctagagcttgtaatg
acagtattgcacgccggaggtaaatttgataaagatacatacaaggtttctggtggtctg
catggtgttggggtttcctgtgtgaatgccctgtctacccttttgaaggccgaggtccat
cgcgatggaaagatttaccagcaggagtaccaaattggtaaacctttgtatgatgtgaaa
gaagttggtgtttcggataagacgggtactattgtaacgttccatccagatgcgacaatt
ttcacgcagactaccgtttataattacgatacattggcaaatcgtcttcgtgaacttgca
tttttaaataaaggtgtgagtttgacgttgaatgatgagcgtgaagcaaatgaagacggc
tctgaaaagaaagaaacattctattcagagggtggtctgaaagagtttgtgaaattttta
gatggtaaccgtcagtcgttgattcctgaaccaatttatgttgaaggcgtgaaacaaggt
atccctgttgaactggctttacaatataacgatacgtattcggagaatgtccattcttat
gtgaataacatcaatacgattgaaggtggttctcacgttgcaggtttccgtcgtggtttg
acacgtaccttgaaagcatatgcggacaagtcaggtttgcttaaaaacttaaaagtggaa
attaccggtgatgacttccgcgagggattgacagctgtaatttcggtgaaggttgcagaa
cctcaatttgagggacaaaccaaaactaaattaggtaactccgaggtgatgggggctgta
gatgttgctgttggtgagatcttaggtgtttatctggaagagaatccacgtgaggcaaaa
tctattgttcaaaaggttgtcattgcggctcaagcacgtgctgctgcacgtaaggcccgt
gatttggtccaacgtaaaaccgttatgggtggctctggacttccaggtaaattagccgac
tgtcaagacaacgatcctaccaaatgtgagatttattttgtcgagggggattctgcgggt
ggtactgccaagtctggtcgtgatagaaagcatcaggcgatcatgcctttacgtggtaag
atcctgaacgttgaaaaagcgatggaacataagatctacgaaaatgaggagatcaaaaat
atgtttacagctttgggcgtgagtgtaggtactgccgaagatgctaaggcattgaatatt
gaaaaattacgttatcaccgcatcatcatcatgaccgatgccgatgtggatgggtcccac
attacaacattgatcttgacgttctatttcagatacatgaaggaattgatcgaaagagga
tatgtatatatcgctacaccgccgctatacttggtgaaaaaagggaaagagcatgagtac
gcttggaatgaagaccaacgtatcaatgcaattcaacgtttgaaaggaagtggtaaagag
gatagcgtacacgtacaacgttataaaggtcttggagagatgaatgcagaacagttatgg
gatacaaccatgaatcctgaaacgcgtactttaagacaagtaactattgaaaacgcggca
gaatgtgaccgtatcttctcgatgttgatgggtgatgaagttgctccgcgtcgtgaattt
atcgaaaaaaatgcacgttatgctaaaattgatatttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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