KEGG   Sphingopyxis sp. 113P3: LH20_08725
Entry
LH20_08725        CDS       T04069                                 
Name
(GenBank) recombinase RecR
  KO
K06187  recombination protein RecR
Organism
sphp  Sphingopyxis sp. 113P3
Pathway
sphp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sphp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LH20_08725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphp03400]
    LH20_08725
DNA repair and recombination proteins [BR:sphp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LH20_08725
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LH20_08725
SSDB
Motif
Pfam: Toprim_4 RecR_C RecR_HhH RecR_ZnF Toprim HHH_5 HHH_3
Other DBs
NCBI-ProteinID: ALC12029
UniProt: A0A0M3QD37
Position
1769600..1770196
AA seq 198 aa
MASQEIEALVQQLARLPGLGPRSARRAVLHLMKKRETAFAPLLAALETVSERLVTCAICG
NVDTQDPCAICADPRRDPRSLCVVEEVSDLWALDKSRLFPGKYHVLGGRLSALEGVRPQD
LSIDALVSRVAAGGIDEVVLAMNATLEGQTTAHYLAERLESYPVRLTQLAHGLPVGGELD
YLDEGTLAQALRARRPVG
NT seq 597 nt   +upstreamnt  +downstreamnt
atggcatcgcaagagattgaagctctcgtccagcaacttgcccgtcttccgggccttggc
ccgcgctcggcgcggcgcgccgtgttgcacctgatgaagaagcgcgaaaccgccttcgcg
ccgcttctcgctgctcttgagactgtgtcggaaaggctcgttacctgcgcgatatgcggg
aatgtcgacacgcaggacccgtgcgcaatctgcgctgatccgcgccgcgacccgcgcagt
ctctgcgtcgttgaggaggtgtcggacctttgggcgctcgacaagtcgcggctcttcccc
ggcaaatatcatgtgctgggggggcggctgtcggcgctcgagggcgtgcggcctcaggat
ctcagcatcgacgcgctcgtaagccgcgtcgctgcgggtggcatcgacgaagtggtgctc
gcaatgaacgcgacgctcgaggggcagacgaccgcgcattatctcgccgagcggctcgag
agctatccggttcgcctgacccagctcgcacatggcctcccggtcggcggcgaactcgac
tatctcgacgagggaacgctggcgcaggcgctcagggccaggcgcccggtgggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system