KEGG   Sphingobium sp. RAC03: BSY17_1582
Entry
BSY17_1582        CDS       T04461                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
sphr  Sphingobium sp. RAC03
Pathway
sphr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sphr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BSY17_1582 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphr03400]
    BSY17_1582 (uvrB)
DNA repair and recombination proteins [BR:sphr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BSY17_1582 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BSY17_1582 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_30 Kinesin DUF87 Microtub_bd AAA_22 SRP54 UB2H SWI2_SNF2 TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AOF98430
UniProt: A0A1B3MZB1
Position
complement(1614218..1616401)
AA seq 727 aa
MAIQIRTTLDEPDTGTSFVPHRPARPEKSEGGRRFTLVSDYEPAGDQRTAIPELVDGALA
GEKDQVLLGVTGSGKTFTMAKMIEALQRPALILAPNKILAAQLYGEFKSFFPDNAVEYFV
SYYDYYQPEAYVARSDTYIEKESSVNESIDRMRHSATRSLLERDDVIIVASVSCIYGIGS
VETYSAMTFSMKKGGIEDQREIIRKLVALQYKRNDAGFSRGNFRVKGDNLEIFPSHYEDT
AWRISFFGDEIEEIVEFDPLSGRKVASLDYVKVFPNSHHVTPGPTLKQAMEAIRHELTER
LKELEAEGKLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYLP
ENALLFVDESHQTVPQIGAMARGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQTV
SVSATPGNWEMEQTGGVFSEQVIRPTGLIDPPVEIKPVEDQVDDLINECRKVAAQGYRTL
VTTLTKRMAEDLTEFMHEAGLKVRYMHSDVETLERIELIRDLRLGVYDVLIGINLLREGL
DIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRITGSMERALGETSR
RREKQEAYNLEHGITPTTIKRNIGDIIAHVASKDQVTVDTGLDDRPHLVGHNLRAYIEDL
EKKMRAAAADLEFEEAGRIRDEIRKLEADELGLPHEQQVAAPRGRATEGKPGTRKLRYGK
TQKKFGR
NT seq 2184 nt   +upstreamnt  +downstreamnt
atggccattcagatccgcacaaccctcgacgaacccgataccggcaccagtttcgtgccg
caccgcccggcgcggccggaaaagagcgaggggggacggcgcttcacgctggtcagcgat
tatgaaccggcgggtgaccagcgcaccgcgatccccgaactggtggatggcgcgctggcg
ggcgagaaggatcaggtgctgctgggcgtcaccggctccggcaagaccttcaccatggcc
aagatgatcgaagcgttgcagcgccctgccctgatcctagcacccaacaagattctcgcg
gcccagctctatggcgagttcaagagcttctttcccgacaatgcggtcgaatatttcgtc
agctattatgattattaccagcccgaagcctatgtcgcgcggtcggacacctatatcgag
aaggaaagctcggtaaacgaaagcatcgaccggatgcgccattcagcgacgcgatcgctg
ctggagcgggacgatgtcatcatcgtcgcgtcggtcagttgcatttacggtatcggctcg
gttgaaacctattcggccatgactttctcgatgaagaagggcgggatcgaggatcagcgc
gagatcatccgcaagctggtcgcgctccaatataagcgcaacgatgcgggtttttcgcgc
ggcaattttcgcgtgaagggcgacaatctggagattttcccgtcgcattatgaagataca
gcctggcgcatatcctttttcggggacgagattgaagagattgtcgagttcgatccgctg
tcggggcgcaaggttgcgagcctcgactatgtgaaggtctttcccaatagccaccatgtc
acccccggcccgacgctgaaacaggcgatggaggcgatccgccatgaactgaccgagcgg
ctcaaggaactggaggctgaaggcaagctgctggaagcgcagcggctggagcagcggacc
aatttcgatttggagatgatcgcggcgacaggcagttgcgcaggcatcgaaaattattcg
cgcttcctaaccggacgcctgccgggcgaaccgccgccgaccctgttcgaatatctgccc
gaaaatgcgctactgttcgtcgatgaaagccaccagaccgtgccgcagatcggcgcgatg
gcgcgcggcgatcatcggcgcaagatcacgctggccgaatatggttttcggctgccgagt
tgcatcgacaaccggccgttgcgcttcaacgaatgggatgcgatgcggccgcagacggtc
agcgtttccgcaacgcccggcaattgggaaatggagcagaccggcggcgtgttcagcgag
caggtgatccgccccaccggcctcatcgacccgccggtcgagatcaagccagtcgaggat
caggtcgacgacctcatcaacgaatgccgcaaagtcgcggcgcaaggctatcgcacgctc
gtcaccaccctgaccaagcgaatggccgaggatctgaccgagttcatgcatgaggcgggc
ttgaaggtccgctacatgcatagcgatgtcgagacgctggagcggatcgagctgatccgc
gacctgcggctgggtgtctatgacgtgctgatcggcatcaacctgctgcgtgaggggctg
gacattcccgaatgcggcctggtcgcgatattggatgcggacaaggagggctttttgcgc
tccgaaacctcgctcatccagacgatcggccgcgcggcgcgcaacgtcgacgggcgggtg
atcctttatgccgatcgcatcaccggcagcatggagcgggcactaggcgaaacatcccgg
cggcgcgaaaagcaagaggcctataacctggaacatggcatcacgccgaccacgatcaag
cgcaatatcggcgacatcatcgcccatgtcgcgtcaaaggatcaggtcacggtcgacacc
ggtctggacgaccgcccccatctggtcggccacaatctgcgcgcctatatcgaggatctg
gaaaagaaaatgcgcgccgccgccgccgacctggagttcgaggaagccggacgcatccgc
gacgaaatccgcaaactggaagccgacgaactgggcctgccgcacgagcagcaggtggcg
gccccaaggggccgcgcgaccgagggcaagccggggacgcggaaattgcggtacgggaag
acacagaagaaattcgggcggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (23)   

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