KEGG   Sphingobium sp. RAC03: BSY17_1958
Entry
BSY17_1958        CDS       T04461                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
sphr  Sphingobium sp. RAC03
Pathway
sphr00300  Lysine biosynthesis
sphr00470  D-Amino acid metabolism
sphr01100  Metabolic pathways
sphr01110  Biosynthesis of secondary metabolites
sphr01120  Microbial metabolism in diverse environments
sphr01230  Biosynthesis of amino acids
Module
sphr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sphr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BSY17_1958 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BSY17_1958 (lysA)
Enzymes [BR:sphr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     BSY17_1958 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AOF96510
UniProt: A0A1B3MTS2
Position
2000905..2002170
AA seq 421 aa
MDHFDYVDGTMRVEQVPMAAIADAVGTPVYVYSTATLERHVGVFREGLAALDNPLIAFAV
KANPNAAVLATLAKLGLGADVVSGGELLRAVAAGIPADRIVFSGVGKTADEMRLALDHGI
FQFNLESEPEAEMLSQVALSMGKRAPVAYRINPDVDAGTHAKISTGKSENKFGIPYDRAL
ESYAAARDLPGLDVQGVAVHIGSQLTDLAPLEAAFTKVGALITALREAGHDIRTADLGGG
LGVPYDPSQPLPPSPADYGAMVCRVTQGWPVRLMFEPGRVIVGNAGALLSRVVRVKQGAK
APFVIVDAAMNDLLRPSLYDAWHDIRAVAPSGKQAAANVVGPVCETGDTFAMGRDMDVVE
AGDLVAFMTAGAYGATMAGTYNSRPLTPEVLVSGDRWAVVRARPPIETLIEGDSIPDWLA
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
ttggaccatttcgactatgtggacggcaccatgcgggtggagcaggtgccgatggcggcg
atcgccgatgcggtcggcacgccggtctatgtctattcgaccgcgacgctggaacgccat
gtcggcgtgttccgcgaagggctggccgcgctcgacaatccgttgatcgcctttgcggtc
aaggccaatcccaatgccgccgtcctggcgacgctggcgaagctgggtctgggcgcggac
gtggtgtccggcggcgaactgctgcgcgcggtggcggcgggcatcccggccgaccgcatc
gtcttttctggcgtcggcaagaccgcagacgaaatgcggctggcgcttgaccatggcatt
ttccagttcaatctggaaagcgaaccggaagccgagatgctgtcgcaagtcgcgctgtcg
atgggcaagcgcgcgccggtcgcctatcgcattaatcccgatgtcgatgcgggcacccat
gccaagatatcgaccggcaagtcggaaaacaaattcggcatcccctatgaccgcgcgctg
gagagctatgccgccgcccgcgatctgccggggctggatgtgcagggcgtcgctgtccat
atcggtagccagctgaccgatctcgccccgctggaggcggccttcaccaaagtcggcgcg
ctgattactgcgctgcgcgaagctggccacgacatccgcaccgcggacctgggtggcggc
cttggcgtgccctacgacccgtcccagccgctgccgcccagccccgccgattatggcgcg
atggtgtgccgcgtgacgcagggctggccggtgcggctgatgttcgagccggggcgggtg
atcgtgggcaatgcaggcgcgctgctctcgcgcgtggtgcgcgtgaagcagggggccaag
gcacccttcgtcatcgtcgacgcggcgatgaacgacctgttgcggcccagcctctatgac
gcctggcatgatattcgcgcggtcgcgccatcgggcaagcaggcggcggccaatgtcgtg
gggccggtgtgcgagacgggcgacaccttcgccatgggtcgcgatatggacgtggtcgaa
gcgggcgatctggtcgccttcatgaccgcaggcgcttatggcgcgacgatggcgggcacc
tacaacagccgcccgctcacgcctgaagtgctggtatcgggcgaccgctgggccgtggtc
cgcgcccgtccgccgatcgagacattgatcgagggcgattcgatccccgactggctggca
gactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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