KEGG   Sphingobium sp. TKS: K426_17890
Entry
K426_17890        CDS       T04965                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
spht  Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:spht00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spht03032]
    K426_17890
   03400 DNA repair and recombination proteins [BR:spht03400]
    K426_17890
Enzymes [BR:spht01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     K426_17890
DNA replication proteins [BR:spht03032]
 Prokaryotic type
  DNA Topoisomerases
   K426_17890
DNA repair and recombination proteins [BR:spht03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      K426_17890
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AMK24508
UniProt: A0A126RQP4
Position
1:3626702..3627709
AA seq 335 aa
MPPKPIVHANDSLPGITRRTLKRGWAYFDASGARITDREEIDRLNAIAMPPAYRDCWFCS
TPNGHIQATGYDDRGRKQYRYHTDFRAAREAEKYAGCAAFGHALPKLRARIEADLSKRGL
RKERTLAAVVRLLDLAKVRIGNEQYAAANKSFGATTLRRRHVDLRGQALRLRYRAKSGRE
HELTVTDRRLARFARAVQDLPGQHLFQYLDEEGLARPITSSDVNAYIAQAMGGDFTAKHF
RTWGASVIAFEVLAAESLSLKQMIAPVAEALGNTPAISRKSYIHPALIELCRNGQDEWRE
GLRLPRATRYLSRYERGLIALLESLDTVSALPLAA
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgccgccaaagcccatcgtccacgccaatgacagcctgcccggcatcacgcgccggacc
ctgaaaagaggatgggcctatttcgacgccagcggcgcgcgcatcaccgaccgggaagag
atcgaccggctgaacgccatcgccatgccgcccgcctatcgcgattgctggttctgctcc
acgcccaatggccatatccaggcgaccggctatgatgatcggggccgcaagcaatatcgc
tatcacaccgatttccgcgctgcgcgggaggcggagaaatatgccggatgcgccgccttc
ggccatgccctgccgaaactgcgcgcccggatcgaggccgatctctccaaaaggggtctg
cgcaaggaaaggacgctggccgccgtcgtgcgcctgctcgatctggccaaggtccgcatc
ggcaatgagcaatatgccgccgcgaacaagagcttcggcgcaaccacgctacgccgccgc
catgtcgacctgcgcggtcaggcgctgcgcctgcgctaccgcgccaaatcggggcgcgag
catgagctgaccgtcaccgaccgccgcctggcccgcttcgcgcgcgcggtgcaggatctg
ccgggacagcatctgttccaatatctggatgaggaaggcctcgcccggccgatcacctcc
agcgacgtcaacgcctatatagcgcaagcgatgggcggcgatttcaccgccaagcatttc
cgcacctggggcgcttccgtcatcgccttcgaggttttggcggcggaaagcctgtcgctc
aagcagatgatcgcgccggtggcggaagcgctgggcaacaccccggcgatcagccgcaaa
agctatatccaccccgcattgatcgagctttgccgcaacggacaggatgaatggcgcgaa
gggcttcgcctgccgcgcgcaacccgctatctgtcccgttacgaacggggactgatcgcc
ttgttggagagcctggacaccgtttccgcgctcccgctggcggcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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