KEGG   Sphingobium sp. TKS: K426_27555
Entry
K426_27555        CDS       T04965                                 
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
spht  Sphingobium sp. TKS
Pathway
spht03420  Nucleotide excision repair
spht03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spht00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    K426_27555
   03430 Mismatch repair
    K426_27555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spht03400]
    K426_27555
Enzymes [BR:spht01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     K426_27555
DNA repair and recombination proteins [BR:spht03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     K426_27555
   MMR (mismatch excision repair)
    Other MMR factors
     K426_27555
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C AAA_22 AAA_30
Other DBs
NCBI-ProteinID: AMK26410
UniProt: A0A126RW03
Position
pTK1:480473..482245
AA seq 590 aa
MADEETAADAAGRLALERVYACFDAGQSFRLEAGAGAGKTYSLEKALRRLIELRGTELVR
KRQQIGCITFTNVAKDEIIARVQAHPAVRPETIHGFCWSVLQDFQPQLRAIVPDLPGWGE
RLADAGVGGLGARKVNYDLGYPRVTPDEVSLKHEDVLTLMTELLARPKFRLVLAKRYPVL
LIDEYQDTDAGFVEALKQHFLGTGTGPIIGLFGDHWQKIYGEGCGAVEHAALEVIDKNAN
FRSAEPIVAVLNRMRPDLEQIPSDPDAPGEARIFHTNAWPGQRRTGQGGGHWTGDTSPEA
ARAYLDHLKQRLSDEGWDFAVERTKILMLSHSVLAKEQGYPTIQSIYGQFNDAWLKKEDP
HIKFLADQLEPACAAFQAKRYGEMFESLGAGRPCIRRHHDKVAWTQSLEQLIQLRATGTI
GAVIDLIKGQAHMHLPEAVLDREQRLADAGPEPVEGESRRIAQLRRLRDVAYTELMAVDA
FIDGHTPFATKHGVKGAEFENVLVIVGRGWNKYNFAQMLERLDPGPPADKVESFESNRNL
FYVACSRPKRRLALLFTQILSELAMAKVTALFGEANVIPLPADPAGGAAP
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggctgacgaagagaccgccgccgacgcggccggccgccttgcacttgagcgtgtctat
gcgtgcttcgatgccggacaaagcttccggctcgaggcaggcgcgggcgcaggcaagaca
tattccctagaaaaggcgctgcgccgcctgatcgaacttcgcggtacggaacttgtgcgt
aagcgccaacagattggttgcatcacgttcacgaacgtggcgaaggatgagattatcgcg
cgcgttcaggcccacccggcggttcggccggagaccattcacggattttgttggtcagta
ttgcaggactttcagccccagctccgcgcgatcgtgcctgacttgccgggatggggagaa
cgtctcgccgatgccggggtgggggggctaggcgcgaggaaggtcaattacgacctcggc
tatccccgggtgacgccagacgaggtgtcattgaagcacgaagacgtgctgacgctgatg
acggagctgctggcacggcccaagtttcgcttagtgctagcgaagcgctatcccgtgctg
ctgattgacgaatatcaggacaccgatgcgggcttcgtagaggctctaaagcagcatttc
ctaggtacgggtacggggcctatcattggcctgttcggcgaccattggcagaagatctac
ggtgagggatgcggtgcggtcgagcacgcagcactcgaggtgatcgacaaaaacgccaat
ttccgatccgccgaacccatcgtcgcggtgctcaatcgcatgcgacccgatctcgaacag
atccccagcgacccggatgcgccgggtgaggctcgaatctttcacacgaatgcatggccg
ggccagcgccgaacgggccagggcggtggtcactggactggcgacacgagccccgaggcg
gcacgcgcctatctcgatcacctgaagcagcgattgtcggatgagggctgggactttgcc
gtcgaacgcaccaagatcctgatgctcagccacagcgtgctggcgaaggaacagggctat
ccgaccatccagagcatttatggccagttcaacgatgcctggctcaagaaagaagacccc
cacatcaaatttctggccgaccagctcgagccagcatgcgcggcctttcaggcgaagcgc
tatggcgagatgtttgagagcctaggcgccggcaggccgtgcatccgtcggcatcacgac
aaggtcgcatggacgcagtctctcgaacagcttatccaattgcgagcgaccggcacgatc
ggcgccgtcatcgacctcatcaaaggccaggctcacatgcatctgcccgaggcggtgctg
gaccgcgagcaacgcttggccgacgccggacccgaaccggtcgaaggcgagtctcggagg
atcgcccagctgcgaaggctacgggacgtcgcctacaccgagctgatggcggtggatgcg
ttcatcgatggtcacacgcccttcgccaccaagcacggcgtgaagggtgcggagttcgag
aacgtgctcgtcatcgtcggccgtggctggaacaagtataatttcgcgcagatgctggaa
cggctcgacccaggccccccggcagacaaggtcgaatccttcgagagcaatcgcaacctg
ttctacgtcgcgtgctccagaccgaagcgccgattggcgctgttgttcacccagattcta
agcgagctcgcgatggcgaaggtgacagctttgttcggcgaggccaatgtgatcccgctt
ccagcagatcccgcgggcggggccgcgccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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