KEGG   Sphingorhabdus sp. YGSMI21: CHN51_10350
Entry
CHN51_10350       CDS       T05308                                 
Name
(GenBank) hypothetical protein
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
sphy  Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:sphy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphy03032]
    CHN51_10350
   03400 DNA repair and recombination proteins [BR:sphy03400]
    CHN51_10350
Enzymes [BR:sphy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     CHN51_10350
DNA replication proteins [BR:sphy03032]
 Prokaryotic type
  DNA Topoisomerases
   CHN51_10350
DNA repair and recombination proteins [BR:sphy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CHN51_10350
SSDB
Motif
Pfam: Top1B_N_bact Topoisom_I Phage_integrase
Other DBs
NCBI-ProteinID: ATW05493
UniProt: A0A2D3RID5
Position
2128066..2129073
AA seq 335 aa
MIHDSSLGIPSLVYSSDEEPGISRVRRGRGFQYLLPDKSHLKCRVELARIRKLGIPPAYS
DVWICPKANGHIQATGFDAAARKQYRYHDDWRLYRDRQKFDQLAEFATRLPRIRRKVNAL
LRPDGAADVQSKEVAIAALVRLIDRTAIRVGGSSRMSKGATTLDIGNIRYDEDRLRLRYR
AKGGKKVSCSLRDTRLQRILEQIDDLPGKRLFQYVGSDGAVHPLDSGDVNDWLKEASGMD
SLSAKMFRTWHGSVAALDAIASLENPTNKQACEAAAATLRNTPAICRKSYVHPAVFDLVE
MDAEERAALIEGLGADIAGLRVGENRFVGLIGGGR
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgatccacgattcctctctcggcatccccagcctggtctacagcagcgacgaggagccg
ggcatatcgcgggtgcggcgggggcgggggtttcaatatctattgcccgacaagagccat
ctgaaatgccgggtggaactggcgcggatcaggaagctgggcattccgccggcctatagc
gacgtgtggatctgccccaaggccaatggccatattcaggcgaccggtttcgatgccgcg
gcgcgcaagcaatatcgctatcatgacgactggcggctctatcgcgaccggcagaaattc
gaccagctggcggaatttgccacgcggttgccgcggatccggcgcaaggtgaacgctttg
ctgcggcccgacggcgcggccgatgtgcaaagcaaggaggtggcgattgccgcgctggtg
cggctgatcgaccggaccgccatccgggttggcggcagctcgcggatgagcaagggggcg
actacgctggatatcggtaatatccgctatgacgaggacaggctgcgcctgcgctatcgc
gccaagggcgggaagaaggtgagttgcagtctgcgcgacacgcggctgcagaggatattg
gagcagattgacgatctgcccggcaagcgcctgttccaatatgtcggcagcgacggcgcg
gtccatccgctcgacagcggcgacgtcaacgactggctgaaagaggcgtcgggcatggac
agcctgagcgccaaaatgttccgcacctggcacggcagcgtcgccgcgctggacgcgatt
gcttcccttgagaacccgacgaacaaacaggcctgcgaagccgccgctgcgaccctgcgc
aacacgccggcgatttgccgaaagagctatgtccatccggcggtgttcgatctggtcgag
atggacgcggaggaacgggcggcgctgatcgaggggcttggcgcggatatcgcgggcctg
cgggtgggcgagaaccgctttgtcgggttgattggcggagggcgttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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