KEGG T00606: Spea

Shewanella pealeana: Spea_0580

Entry

Spea_0580 CDS T00606

Definition

glycoside hydrolase family protein

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

spl Shewanella pealeana

Pathway

spl00052	Galactose metabolism
spl00511	Other glycan degradation
spl00600	Sphingolipid metabolism
spl01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:spl00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:spl00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:spl00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(709947..713180)

AA seq 1077 aa
MKSHALMNTRQLTSKNVTSCRLIASVVALLVCPLSFASDAPLRWQNHQIFEQNKQPPHAS
FFGYSSQEKALTDEYRDSENFFDLNGRWQFHYANNPSSAPKDFAQVEANLADWQSIQVPG
NWETQGFGHAIYLDERYPFSTTWPDAPEDHNPTGSYRREINLPQSWQDKQVFLHIGAARS
ALTAFVNGQEVGYSQGAKTPAEFDITPYLNQEQNLLALQIIRWSDASYLESQDMLRVSGI
ERDVYLYATEKQRISDIDAQYQMSANLDKAEVALKLKLENHAKAKDVSLSYRLLSPQGVE
VSRGEQKIAKLAKQDTRQFDFPLNSPMLWSAETPNLYQLIVSLNDNQGELLQASSQHLGF
RRVEINNGQLLVNNKAITIRGVDRHETDPDTGHVVSRASMETDIRLMKQNNINAVRSSHY
PNDPYWLSLTDKYGLYVIDEANIESHPLAIDKNTQLGNEMSWLPAHQARVERMVERDKNH
PSIIIWSLGNEAGEGKLFAALYDWIKQRDPSRPVQYEPAGQHAYTDIVAPMYPSIERIEK
YAKEHQDRPLIMIEYAHAMGNSVGNLQDYWDVIEQYPQLQGGFIWDWVDQSLAFTNENGQ
RYWAYGKDYHPDMPTDGNFLNNGLVDPDRNPHPHLSEVKKVYQPLKLTELTRNQQDVTFT
LSNRYDFIDTLGLNLIWTLQQDGRPVAEGLVAMPQVKADTSQVLNFTLPESAIKTMQQSP
QYEYQLLLEVKVDTPQPMLPSDHLIAFEQFALQSAKPVTAKTIDAIKETRDSWILGKNNA
QYLFNKDTGWLTDIRVEGESQLKSPLIANFWRAPTDNDLGNQMPKWAGMWQDAGQELELV
SITRSKGQHAALKVTHQHPKLGFTLTSSYRVSDQAKLLVSSDFTPGDGELADLPRFGFSA
RLPFEVRFMHYFGRGPEETYTDRKTGNPVAWYALPIEQTFHRYSRPQETGQRTDVRYVAV
TNNKGAGLLAQTTMNSEMLQTSLWPFAQADIDFRDGDAEGSASGLVPVTANHGAEIPIRD
FVTWNIDYKQMGVGGDTSWGRPVHAPYRIAPKAMSFSFSLEPISANTDIKKQARGLQ

NT seq 3234 nt +upstreamnt +downstreamnt
atgaagagtcatgccctgatgaatacccgacaattaaccagcaaaaatgtaacctcctgc
cgccttatcgccagtgtagttgcccttttagtctgccctctgagctttgctagtgatgcg
cctctaagatggcagaaccaccaaatcttcgagcagaacaagcagccaccccatgcgagc
ttctttggctattccagccaagaaaaagccctcactgatgagtatagagacagtgaaaac
ttcttcgatcttaacggtcgctggcagtttcattatgcgaacaatccatcgagcgcccca
aaggattttgcgcaagtagaggccaaccttgctgactggcagagcattcaagttcccggc
aattgggaaacacaaggttttggccacgccatctatttagatgagcgctacccatttagc
accacctggcccgatgcccctgaagatcacaacccgacgggtagttaccgccgtgagata
aatctgccgcagagttggcaagacaagcaggtatttctgcacattggcgccgcacgctcg
gcgctgaccgccttcgttaatggccaggaggtcggttatagtcagggcgctaagacccct
gcagaatttgatattaccccttatctaaatcaagaacagaatctactggccttacagatt
attcgctggagtgatgccagttatttagaaagccaagacatgcttagggtcagtggcatc
gagcgcgatgtctatctgtatgctactgagaaacagcgtattagcgatatcgacgcccaa
tatcagatgtcggcaaacttagataaggctgaagttgcacttaaactgaagttagaaaac
catgccaaagctaaagatgtgagccttagctatcgactgctatcgcctcaaggtgtagag
gttagccgcggtgaacagaaaatagctaaactggcaaagcaagatacacggcagttcgat
tttcctctcaattctcctatgctttggagcgcagaaactcccaacctctatcaactaatt
gtcagccttaacgataaccaaggtgaattgctacaagccagtagccaacatttgggcttt
cgccgagtcgagattaacaatggtcaactactggtcaataacaaggcgatcaccattcgt
ggcgtcgacaggcacgaaaccgatcccgatacaggccacgttgtcagtcgagccagtatg
gaaactgatatccgcctgatgaagcagaacaatatcaatgcggtgcgctcgagccattat
cccaatgatccttactggctgagcctcaccgataagtatggtctgtatgtaattgatgaa
gccaatatcgaatcacatccgctagctatcgataaaaatacccagcttggtaatgagatg
agctggttgccagcccatcaagcgcgagtcgaacgtatggtcgagcgcgataagaatcac
ccctctatcatcatctggtctctgggcaacgaagccggagaaggtaaactctttgccgcg
ctctatgattggattaagcagcgcgacccgagtcgccctgtacagtatgagcctgccggt
caacatgcttataccgatatcgtcgcccctatgtatccgtccattgagcgcatcgaaaag
tacgccaaagagcatcaggataggccacttattatgattgagtacgcccatgccatgggc
aactcggtcggtaatctgcaagattactgggatgtcatcgaacaataccctcagcttcaa
ggcggctttatttgggactgggtcgaccaatccctcgcctttaccaatgaaaatggtcag
cgctattgggcctacggtaaagactatcatcctgatatgcctaccgatggtaactttcta
aataatggtttagtggatcccgatagaaacccgcacccacatctatctgaggtgaagaag
gtttatcagccgctcaagctaactgaactaacccgaaaccagcaagatgtgacgtttacc
ttaagcaaccgctatgactttatcgacaccttagggctaaacctaatatggacattgcaa
caagacggacgtccggttgccgaaggcttggtcgcgatgccacaagtaaaggcggataca
agccaagtgctcaactttaccttgcctgagtctgcgattaagactatgcagcaaagcccg
caatatgagtatcaactgctattagaggtcaaggtcgatacccctcagcctatgttacca
agcgatcacctaatagccttcgagcaattcgccctgcaatcagctaagcctgtaacggca
aagaccatcgatgcgataaaggagacccgtgatagctggatattagggaaaaataacgcc
cagtatctgttcaacaaagacacaggctggttaactgacattcgagtcgaaggagagtct
caactcaagagcccgttaatagccaacttttggcgcgcccctaccgataacgacttaggt
aaccagatgcctaagtgggcaggtatgtggcaagacgcagggcaagaacttgaactcgtc
tccatcactcgcagcaaaggccagcatgcggcgcttaaggttacccaccagcaccctaag
cttggctttacgcttacctcctcttatcgagtgagcgatcaggccaaactgttagtcagc
agtgactttacccctggagatggtgaacttgccgatcttccccgcttcggtttttctgca
aggctccctttcgaggtgcgctttatgcactactttggccgcggccccgaagagacctat
accgatagaaaaaccggcaatcctgttgcctggtatgccctgccgatagagcaaaccttc
catcgctattcacgcccgcaggaaactgggcaacgcaccgatgtacgctatgtcgccgta
accaataacaagggagcaggcctacttgcgcaaaccaccatgaacagtgaaatgctgcaa
acgagtctgtggccatttgctcaagcagatatcgactttagggacggcgatgccgaaggt
tcagcatcagggctagtaccagtgacagcgaaccatggcgccgagatcccaatccgagat
tttgtcacctggaatatcgattacaaacagatgggcgtcggcggtgatacctcatggggg
cgtcctgtacacgcaccctatcgtatcgcaccaaaagcgatgagcttcagctttagccta
gagcccatttcagctaacacagatataaaaaagcaggctagaggcctgcaatag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SPL (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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