KEGG T00606: Spea

Shewanella pealeana: Spea_2535

Entry

Spea_2535 CDS T00606

Definition

isocitrate dehydrogenase (EC:1.1.1.42)

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

spl Shewanella pealeana

Pathway

spl00020	Citrate cycle (TCA cycle)
spl00480	Glutathione metabolism
spl01100	Metabolic pathways
spl01110	Biosynthesis of secondary metabolites
spl01120	Microbial metabolism in diverse environments
spl01210	2-Oxocarboxylic acid metabolism
spl01230	Biosynthesis of amino acids

Module

spl_M00009	Citrate cycle (TCA cycle, Krebs cycle)
spl_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:spl00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:spl00480]

SSDB

Motif

Pfam:

IDH

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3085561..3087783)

AA seq 740 aa
MNDKTSTIIYTETDEAPALATLSLLPIIQKFTQTAGVDVETRDISLSGRVIANFPENLTA
EQRINDALAELGELAKKPEANIIKLPNISASIPQLKACIQELQNKGYDIPNYPDEPANEA
EKEIQSRYDKIKGSAVNPVLREGNSDRRAPGSVKKFAQKNPHSMGKWTSDSKSHVAHMNE
GDFYASEKSVTLADAGSVSIVLNKADGSEQVLRSAIALQAGEVIDSAVMSKKALVEFYER
ETNLAKEQNVLLSLHLKATMMKVSDPILFGHAVKVYYKDVFAKHGQLFEELGVDVNNGVG
DVYAKIATLPSDQKAVIEADLAAVYSERAELAMVDSDRGITNLHVPSDVIIDASMPAAIR
TSGQMWGPDGQLKDMKAMIPDRCYAGVYQETIDFCINNGAFDPSTMGSVPNVGLMAQKAE
EYGSHDKTFEIAAAGTVNVVDQAGKVLMSHNVEAGDIFRMCQVKDAPIRDWVKLAVNRSR
LSATPAVFWLDSARAHDTEIISKVELYLKDHDTNGLELHIMSPVDATRFTLDRVKAGKDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKEGH
LRWDSLGEFLALGASLEHLSQTTGNAKAQVLADTLDIAIGQFLDSNKSPSRRVGELDNRG
SHFYLAMYWAQALVAQTKDAALQAEFSALAESLTSNEAKIIGELNGVQGPVVDLGGYYRL
DAAKASSAMRPSTTLNSIVG

NT seq 2223 nt +upstreamnt +downstreamnt
atgaacgataaaacatcaacgatcatctataccgaaactgacgaagcgccggcattagcg
acactttctttgttacctattatccaaaagtttactcaaaccgcaggcgttgacgttgaa
actcgtgacatctctttatctggccgtgtcattgctaacttccctgaaaacttaactgca
gagcaacgcattaacgatgcacttgcagaactgggtgagcttgctaagaagcctgaagct
aacattatcaagctgcctaacatcagtgcatcaatcccgcagcttaaagcctgtattcaa
gagctgcagaataaaggttacgacattccaaactatcctgatgagccagcgaacgaagct
gagaaagagatccaatctcgttacgataaaattaaaggtagtgcggtaaatccagtactg
cgtgaaggtaactcagatcgccgtgcgccaggttcggtgaagaagtttgctcagaaaaat
cctcattcaatgggtaagtggacgtctgattcaaagtcccacgtagcgcatatgaatgaa
ggcgatttttacgcgagtgaaaaatcagtaacccttgccgatgccggtagtgtatcaatt
gtcctgaataaggcggatggttcagagcaagttctacgtagtgcgattgctttgcaagcg
ggtgaagttattgactcggctgtgatgagcaaaaaagcactggttgagttttatgagcgt
gaaaccaatctggctaaagaacagaatgttttactttcattgcacttaaaagccaccatg
atgaaagtgtcagaccctattttattcggtcacgcagttaaagtttattacaaagatgtt
ttcgctaaacatggccagctatttgaagagctaggtgttgatgtaaacaacggtgtgggt
gatgtctacgctaagatcgcgacattaccaagcgatcaaaaagccgtaatcgaggctgat
ttagcagcggtttatagcgagcgcgccgagcttgcaatggttgattcagatcgtggcatt
accaatttacacgtaccaagtgacgtgatcattgatgcatcaatgcctgcagctattcgt
acatctggtcagatgtggggccctgatggtcaattaaaagatatgaaggcgatgattcca
gatcgttgttatgcgggtgtttatcaagaaactatcgatttctgtatcaacaatggtgca
tttgatccaagtaccatgggcagcgtaccaaacgtgggcctaatggctcagaaagctgaa
gaatacggtagccacgataagacgtttgaaatcgctgctgcgggcacggttaatgtcgtt
gaccaagctggcaaggtgcttatgtcgcacaatgtggaagcgggagatatcttcagaatg
tgtcaggtgaaagatgcgcctatccgtgactgggttaaacttgcggtaaatcgttcacgt
ctttcagctacaccagcggtattctggttagattcggctcgtgcacatgacactgaaatc
attagcaaagtagagctttacctaaaagatcacgatacaaacggtcttgaacttcacata
atgtcgccagttgatgcaacacgttttactctggaccgcgtgaaagcgggtaaagatact
atctcggtaaccggtaacgttttacgtgactatctaacggatcttttcccaattcttgaa
cttggcaccagtgctaaaatgttgtcgattgtaccgctaatgaatggcggtggcttgttt
gaaacaggcgcgggtggtagtgcacctaagcatgttcagcaagtagagaaagagggacat
ttacgttgggattccctaggtgaattccttgctctaggcgcatctttagagcatttaagc
cagaccacaggtaacgccaaggctcaggtacttgccgatacgctcgatattgctatcggc
cagttcctcgatagcaataagtcgccttcgcgtcgtgtaggtgagcttgataaccgtggc
agccacttctaccttgcaatgtattgggcacaagcgcttgttgcacaaaccaaagatgct
gcgttacaagcagagttcagcgcattagcagagtcattaactagcaacgaagcgaagatt
attggcgagctgaatggcgtgcaaggccctgttgttgatttaggtggttattaccgttta
gatgcagctaaagcctctagcgcaatgcgtccaagcacaacattaaatagtattgtaggc
taa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SPL (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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