KEGG   Sphingomonas sp. LK11: AV944_05470
Entry
AV944_05470       CDS       T04954                                 
Name
(GenBank) polynucleotide adenylyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
splk  Sphingomonas sp. LK11
Pathway
splk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:splk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AV944_05470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:splk03019]
    AV944_05470
Enzymes [BR:splk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     AV944_05470
Messenger RNA biogenesis [BR:splk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     AV944_05470
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: APX65384
Position
complement(1131118..1132278)
AA seq 386 aa
MGGMTPGTAPWADRPALIALAARLEARFVGGAVRDMLLGLAVADIDLATPLSPETVIDRV
RDSGFKPVPTGIAHGTITAVLPEGPVEVTTLRRDVSTDGRHAVVAFTDDWREDAARRDFT
MNALYADPATGELFDYFGGLDDLKAGRVRFIGDPLQRIAEDHLRILRFFRFHARFGQAVD
EAGLAACAARANDLMALSRERIAAELLKLLVAARAVPVVALMVKHGIFRAVIPEIDAEGV
KRLTRLAEREVAAEIAPDAIRRLAALLPPQAAENVGARLKLSNSDRKRLIAATAGSGDEG
PQALAYRAGLVSAIDRLLLAGESIEPIRDWTPPALPLSGGALVERGIGKGPEVARLLRRI
ETQWIAEGFPDAERVGRIADEAVAQA
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgggcggcatgacgcccggcaccgcaccctgggccgaccgacccgcattgatcgcgctg
gccgcgcggctggaggcgcggttcgtcggcggggcggtgcgcgacatgctgctgggcctg
gccgttgccgatatcgatctggcgacgccgctctcgcccgaaaccgtcatcgaccgggtg
cgcgacagcgggttcaagccggtgccgaccggcatcgcgcatggcacgatcaccgccgtc
ctgcccgagggcccggtcgaggtcacgacgctgcgccgcgacgtgtcgaccgatggccgc
catgccgtggtcgccttcaccgatgactggcgcgaggatgcggcgcggcgcgacttcacg
atgaacgcgctctatgccgatcccgcgaccggcgaattgttcgactatttcggcggtctg
gacgacctgaaggccgggcgggtgcgcttcatcggcgacccgttgcagcggatcgccgag
gatcatttgcgcatcctgcgcttcttccgcttccatgcgcgcttcggccaggcggtcgac
gaggccggactggccgcctgtgccgcgcgcgccaacgaccttatggcattgtcgcgcgaa
cggatcgcggcggagttgctgaaattgctggtcgccgcccgcgccgtgccggtggtcgcg
ctgatggtcaagcatggcatcttccgcgcggtcatccccgagatcgatgcagagggcgtg
aaacggctgacccggctggccgagcgcgaagtagcagcggaaatcgcgcccgacgcgatc
cggcgactcgccgccctcctacctccacaagccgccgagaatgtcggggcgcggctgaaa
ctgtccaatagcgaccgcaagcggctgatcgccgcgaccgccggatcgggcgacgaggga
ccgcaggcgctggcctatcgcgcggggctggtgagcgcgatcgaccggctgttgctggcg
ggcgaatcgatcgagccgattcgcgactggacgccccctgccctgccactgtccgggggt
gcactggtcgaacgcgggatcggcaaggggccggaggtggcgcggctgctccgccggatc
gaaactcagtggatcgccgaaggctttccggatgccgaacgagtcggccgcatcgccgac
gaggcggtggctcaggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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