KEGG   Sphingomonas sp. LK11: AV944_16915
Entry
AV944_16915       CDS       T04954                                 
Name
(GenBank) ATP-binding protein
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
splk  Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:splk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:splk03400]
    AV944_16915
DNA repair and recombination proteins [BR:splk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     AV944_16915
SSDB
Motif
Pfam: HerA_C DUF87 FtsK_SpoIIIE ResIII AAA_10 AAA_22 TrwB_AAD_bind Zot T2SSE AAA_19 AAA_7
Other DBs
NCBI-ProteinID: APX67237
Position
3656705..3658324
AA seq 539 aa
MRAMDGIFIGMGGGKPQAIDLKRANRHGLIAGATGTGKTVTLQTMVEGFSRAGVPSFVAD
VKGDLSGLGLAGSAMGKTHAAFSARAAELGMTDWAYDAAPVQFWDLFGTQGHPVRATVSE
MGPLLLARMMGLNETQEGVLTIAFHVADKEGLLLLDLDDLQAMLAECAARADELTTTYGN
VSKQSVGAIQRALLQLRTQGGEHFFGEPALELSDLIATDDSGRGVVNILAADQLMASPKL
YATFLLWLLSELFEQLPEIGDPDKPKLVFFFDEAHLLFDDAAPALIDTIERVVRLIRSKG
VGVYFITQNPIDVPDKIAGQLGNRVQHALRAFTPRDQAAVRSAAETFRANPGVDVATAIT
ELKVGEALVSLLQPDGSPSPVERTLIAPPRSRVGPAAPEERKILIETDAVGAKYDQAVDR
ESAEELLAAKTQEAAAAAAEAKAATEADKQAAQQAKADAKAAKEAERARIAEQRAAANSP
WAKMASSAARSASSSIGRQVANEIGKQVFGGGSRRRSSNAGGGIVGAVVRGVLGNLFRG
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgcgtgccatggatggcatcttcatcggcatgggtggcggcaagccacaggcgatcgac
ctcaagcgcgcgaaccggcacggcctgatcgcgggcgcgaccggcaccggcaagacggtg
acgctccagacgatggtcgaggggttctcgcgtgccggggtgcccagcttcgttgccgat
gtgaagggcgacctgtcgggcctgggcctcgccggatcggcgatgggcaagacgcacgcc
gccttctccgcgcgcgccgccgaactgggcatgaccgactgggcctatgacgcggcaccc
gtgcagttctgggacctgttcggcacgcagggccatcccgtgcgcgccaccgtgtcggag
atggggccgctgctgctcgcccgcatgatgggcctgaacgagactcaggagggcgtgctg
accatcgcctttcatgtcgcggacaaggaagggctgctgctcctcgacttggacgatctc
caggcgatgctggccgaatgcgccgcgcgagcggacgagctgaccaccacctatggcaat
gtctcgaaacagtcggtcggcgcgatccagcgcgcgctgctccagttgcgcacgcaaggg
ggcgagcatttcttcggcgaacccgccctcgaactgtccgacctgatcgccacggacgat
tcggggcgcggcgtcgtcaacatcctcgccgccgatcagttgatggccagccccaagctc
tacgccacctttctgctctggctgttgtccgaactgttcgagcagcttcccgagatcggc
gaccccgacaaacccaagctcgtcttcttctttgacgaggcgcatctgttgttcgacgac
gcggcgcccgcgctgatcgacacgatcgagcgcgtcgtgcggctgatccggtccaagggc
gtgggcgtctatttcatcacccagaacccgatcgatgtgcccgacaagatcgccggtcag
ctgggcaaccgcgtgcagcacgcgctgcgtgccttcacgccgcgcgatcaggcggcggtg
cgctcggcggcggagacgttccgcgccaatcccggcgtcgatgtcgccaccgccatcacc
gagttgaaggtcggcgaggcgctggtctcactgcttcagcccgatggctccccctcgccc
gtcgagcgcacgctgatcgccccgccgcgcagccgggtcggccccgcggcgccggaggaa
cgcaagatcctgatcgagaccgacgcggtcggtgcgaaatacgaccaggcggtcgaccgc
gaatcggccgaggaactgctcgccgccaagacccaggaagccgccgcggccgccgccgag
gcgaaggcggcgaccgaggccgacaagcaggcggcgcaacaggcgaaggcggacgcgaag
gccgccaaggaggccgaacgcgcccgcatcgccgaacagcgcgcggcggccaactccccc
tgggccaagatggcgagcagcgcggcccgctcggccagttcctcgatcgggcgacaggtg
gccaacgagatcggcaagcaggtattcggcggcggatcgcggcggcgatcgagcaatgca
ggcggcggaatcgtcggggcggtggtgcgcggggtgctggggaatttgtttcgggggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (17)   

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