KEGG   Streptococcus pyogenes MGAS8232 (serotype M18): spyM18_2014
Entry
spyM18_2014       CDS       T00079                                 
Symbol
pnp
Name
(GenBank) putative polynucleotide phosphorylase, alpha chain
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
spm  Streptococcus pyogenes MGAS8232 (serotype M18)
Pathway
spm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    spyM18_2014 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spm03019]
    spyM18_2014 (pnp)
   03016 Transfer RNA biogenesis [BR:spm03016]
    spyM18_2014 (pnp)
Enzymes [BR:spm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     spyM18_2014 (pnp)
Messenger RNA biogenesis [BR:spm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     spyM18_2014 (pnp)
Transfer RNA biogenesis [BR:spm03016]
 Prokaryotic type
  tRNA degradation factors
   spyM18_2014 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 S1_2 KH_2 SPATA25
Other DBs
NCBI-ProteinID: AAL98494
UniProt: Q8NZC6
Position
complement(1674252..1676384)
AA seq 710 aa
MSKQTFTTTFAGKPLVVEVGQVAKQANGATVVRYGESTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
NASAPMAAMFGSSLALSISDIPFNGPIAGVQVGYIDGEFIINPDKEQMEASLLELTVAGS
KEAINMVESGAKELSEDIMLEALLKGHQAIQELIAFQEQIVAVVGKEKAEVELLQVDADL
QADIVAKYNAQLQKAVQVEEKKAREAATEAVKEMVKAEYEERYAEDENLATIMRDVAEIL
EQMEHAEVRRLITEDKIRPDGRKIDEIRPLDAVVDFLPKVHGSGLFTRGQTQALSVLTLA
PMGETQIIDGLAPEYKKSFLHHYNFPQYSVGETGRYGAAGRREIGHGALGERALEQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGTNYTV
LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIAGITPQILEEALAQAKKARFEILDVI
EATIAEPRPELAPTAPKIDTIKIDVDKIKVVIGKGGETIDKIIAETGVKIDIDDEGNVSI
YSSDQAAIDRTKEIIAGLVREAKVGEVYHAKVIRIEKFGAFVNLFDKTDALVHISEIAWT
RTTNVSDVLEVGEDVDVKVIKIDEKGRVDASMKALIPRPPKPEKKEEKHD
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgtcaaaacaaacctttacaacaacatttgcagggaaaccccttgttgttgaagttggt
caagtcgctaagcaagccaatggggcaaccgttgttcgttacggagaatcaactgtcctg
accgcagctgtcatgtctaagaaaatggcaacgggtgatttcttccctcttcaagttaat
tacgaagaaaaaatgtatgccgctggtaaattcccaggaggtttcatgaagcgtgaggga
cgcccttcaacagatgcgaccttgacagctcgcttgattgaccgtccgattcgtcccatg
tttgccgaaggtttccgtaacgaagtacaagtgattaacactgttctttcttatgatgaa
aatgctagcgctccaatggcagcgatgtttggctcatctctggccttgtccatctcagat
attccatttaatggaccgattgcaggtgttcaagttggctatattgatggcgagttcatc
atcaacccagataaagaacaaatggaagcgtcactcttagaattaaccgttgctggtagc
aaagaagccatcaatatggttgagtctggtgccaaagaattatcagaagacatcatgctt
gaggctcttttaaaaggtcaccaagccattcaagaattgattgccttccaagaacaaatc
gtagccgttgttggtaaagaaaaagctgaggttgaactgttacaggttgatgcagactta
caagctgatattgtggctaagtacaatgctcaactgcaaaaagctgttcaagttgaagag
aaaaaagcgcgtgaagcagccacagaagctgttaaagaaatggttaaggctgaatatgaa
gagcgttacgcagaagacgaaaacctagcaaccattatgcgtgacgtggcagaaatcctt
gaacaaatggagcatgctgaagtacgtcgcctcattacagaagacaagattcgtcctgac
ggtcgtaagattgacgaaattcgtccgcttgatgctgtggttgacttcttgccaaaggtc
catggatcaggtctttttacgcgcggtcaaacgcaggccttgtcagttttgactttggcg
ccaatgggagaaactcaaatcattgatggtctggctccagagtacaaaaaaagcttttta
caccactacaatttcccacaatattcagttggtgaaactggtcgttacggagctgctggt
cgtcgtgaaattggacacggtgccttaggtgaacgcgctcttgaacaagtcttgccaagc
ttagaagaatttccttatgctattcgtttagttgccgaagttctagaatctaacggttcg
tcttctcaggcttctatctgtgctggtacccttgctctgatggctggtggtgtaccaatc
aaggctcctgtggcagggattgccatgggtctcatttcagacgggacgaattatactgtc
ttgactgacattcagggtcttgaagaccactttggagatatggactttaaagtggcagga
actcgtgaagggattacagcccttcaaatggatattaagattgcagggattacgcctcaa
atcctagaagaagctcttgcacaagctaaaaaagctcgctttgaaatccttgatgtgatt
gaagcaactatcgctgaaccacgtcctgagttagccccaactgcaccgaaaattgacacc
atcaagattgacgtagacaaaatcaaagtggttatcggtaaaggtggcgaaactattgac
aagattattgccgaaacgggcgtcaaaattgatattgacgacgaaggaaatgtctctatc
tactcaagtgaccaagctgccattgaccgcactaaagaaattattgcaggtcttgttcgt
gaagccaaggtaggcgaagtttaccatgccaaggttatccgtatcgagaaatttggtgcc
tttgtcaacctctttgacaagacagatgcacttgttcacatttctgaaattgcttggact
agaacgaccaacgtgtcagatgtccttgaagtgggtgaagacgttgatgttaaggtcatt
aagattgatgagaaaggtcgtgtggatgcctcaatgaaagctttgattccacgcccacca
aaaccagagaaaaaagaagaaaaacatgactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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