KEGG T00057: SP

Streptococcus pneumoniae TIGR4 (virulent serotype 4): SP_0895

Entry

SP_0895 CDS T00057

Gene name

dnaE

Definition

DNA polymerase III DnaE (EC:2.7.7.7)

Orthology

K02337

DNA polymerase III subunit alpha [EC:2.7.7.7]

Organism

spn Streptococcus pneumoniae TIGR4 (virulent serotype 4)

Pathway

spn00230	Purine metabolism
spn00240	Pyrimidine metabolism
spn01100	Metabolic pathways
spn03030	DNA replication
spn03430	Mismatch repair
spn03440	Homologous recombination

Module

spn_M00260

DNA polymerase III complex, bacteria

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:spn00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:spn00240]
Genetic Information Processing; Replication and repair; DNA replication [PATH:spn03030]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:spn03430]
Genetic Information Processing; Replication and repair; Homologous recombination [PATH:spn03440]

SSDB

Motif

Pfam:

DNA_pol3_alpha PHP HHH_6 tRNA_anti-codon

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

847061..850189

AA seq 1042 aa
MRRIEEKCKLIAQLDTKTVYSFMESVISIEKYVRAAKEYGYTHLAMMDIDNLYGAFDFLE
ITKKYGIHPLLGLEMTVFVDDQGVNLRFLALSSVGYQQLMKLSTAKMQGEKTWSVLSQYL
EDIAVIVPYFDRVESLELGCDYYIGVYPETLASEFHHPILPLYRVNAFESRDREVLQVLT
AIKENLPLREVPLRSRQDVFISASSLEKLFQERFPQALDNLEKLISGISYDLDTSLKLPR
FNPARPAVEELRERAELGLVQKGLTSKEYQDRLDQELSVIHDMGFDDYFLVVWDLLRFGQ
SNGYYMGMGRGSAVGSLVSYALDITGIDPVEKNLIFERFLNRERYTMPDIDIDIPDIYRP
DFIRYVGNKYGSKHAAQIVTFSTFGAKQALRDVLKRFGVPEYELSAITKKISFRDNLKSA
YEGNLQFRQQINSKLEYQKAFEIACKIEGYPRQTSVHAAGVVISDQDLTNYIPLKYGDEI
PLTQYDAHGVEASGLLKMDFLGLRNLTFVQKMQELLAETEGIHLKIEEIDLEDKETLALF
ASGNTKGIFQFEQPGAIRLLKRVQPVCFEDVVATTSLNRPGASDYINNFVARKHGQEEVT
VLDPVLEDILAPTYGIMLYQEQVMQVAQRLAGFSLGKADILRRAMGKKDASAMHEMRASF
IQGSLEAGHTVEKAEQVFDVMEKFAGYGFNRSHAYAYSALAFQLAYFKTHYPAIFYQVML
NSSNSDYLIDALEAGFEVASLSINTIPYHDKIANKAIYLGLKSIKGVSNDLALWIIENRP
YSNIEDFIAKLPENYLKLPLLEPLVKVGLFDSFEKNRQKVFNNLANLFEFVKELGSLFGD
AIYSWQESEDWTEQEKFYMEQELLGIGVSKHPLQAIASKAIYPITPIGNLSENSYAIILV
EVQKIKVIRTKKGENMAFLQADDSKKKLDVTLFSDLYRQVGQEIKEGAFYYVKGKIQSRD
GRLQMIAQEIREAVAERFWIQVKNHESDQEISRILEQFKGPIPVIIRYEEEQKTIVSPHH
FVAKSNELEEKLNEIVMKTIYR

NT seq 3129 nt +upstreamnt +downstreamnt
gtgagaaggatagaggagaagtgtaaattgatcgcacaactagatacaaaaacagtctat
agttttatggaaagcgtcatttcgatcgaaaagtatgtgagagcagctaaagaatacggc
tacactcatttggctatgatggatattgacaatctttatggcgctttcgactttctagag
attacaaaaaaatacggcattcatcctttgctagggcttgaaatgacagtgtttgtagat
gatcagggagtgaatttgcgctttttagctctatctagtgtgggctatcagcagttgatg
aagctttcgacagccaagatgcagggggagaaaacttggtcagtcctgtcccagtacctg
gaggatatcgcggtcattgtgccttattttgatagagttgagtcgttagaactaggctgt
gattactatataggggtttatccagaaacactagcaagcgaatttcatcatcctatctta
cctctttatcgggtcaacgcttttgaaagcagggatagagaagttcttcaagttttaaca
gcgattaaagaaaatctaccgctcagagaagttcccttgcgttcgagacaagatgtcttt
atatcagcaagttctttagagaaactattccaagagcgttttccgcaagctttggacaat
ttagaaaagcttatttcaggcatttcttacgacttggatactagtctgaaactgcctcgt
tttaatccagctagaccagcagtagaggagttgagagagcgtgctgaactggggcttgtt
cagaaggggttgactagtaaagaatatcaagatagactagaccaagaattgtctgttatt
catgatatgggctttgatgattatttcttggttgtttgggatttgttgcgttttggacaa
tcgaatggctattatatgggaatgggaaggggttctgcagtaggcagtttggtttcttat
gccttagacatcacggggattgacccagtagagaaaaatctgatttttgaacgctttctt
aatcgtgaacgctataccatgcctgatattgatattgatatcccagatatttatcgtcca
gattttatcagatatgttggtaataaatatggtagtaaacatgcggcacaaatcgttact
ttttcaacctttggagccaagcaagctcttcgagatgtcttgaaacgctttggtgtgcca
gagtatgaattatctgcaattactaagaaaatcagttttcgtgacaatcttaagtcggcc
tatgagggaaatctccagtttcgtcagcaaatcaatagtaagttagaataccaaaaagct
tttgagattgcttgcaagatagagggctatccaaggcaaacctctgtccatgcggctggt
gttgtaattagtgaccaagatttaaccaactacattcctctaaagtatggtgatgaaatt
ccactgactcagtatgatgctcatggagttgaggctagcggacttttgaagatggacttt
ctgggactacgaaatttgacctttgtccagaagatgcaagagttgcttgctgaaacagaa
ggtattcatctgaaaattgaagaaatcgatttagaagacaaagaaacgttagctttattt
gcctctggtaatacaaaaggtatctttcaatttgagcaaccaggtgccattcgtctgctt
aagcgtgtgcaaccagtctgttttgaagatgtcgtcgcgactacttctctaaatcgaccg
ggtgctagtgactatatcaataattttgtggcaagaaagcatgggcaggaagaagtgact
gttctggatccagtactggaggatattttggctccaacctacggcataatgctctatcag
gagcaggttatgcaggttgcccagcgacttgccggatttagtcttgggaaagccgatatt
ttgcgtcgggctatggggaaaaaggatgcctctgccatgcatgagatgagggcttccttt
attcaaggttcattagaagctggtcatactgtggaaaaagcagagcaggtctttgatgtt
atggagaagtttgcaggttatggttttaacaggtcacacgcctatgcctactcagccttg
gccttccagttggcttatttcaaaacgcattatccagccattttttatcaggtcatgtta
aattcttccaacagtgattacttaatagatgcacttgaagcaggttttgaagtagcctct
ctatccatcaacaccattccctatcacgataaaattgccaacaaggccatctatctaggt
ttgaaatccattaaaggagtcagtaatgatttagctctctggattattgaaaatagacct
tattctaacattgaagattttatagctaaattacctgagaattatctgaaacttcctctg
ctagaacctttggtaaaagttggtcttttcgattcatttgaaaaaaatcgtcaaaaagta
tttaataacttagctaatctatttgaatttgtgaaagagttgggaagtttgtttggagat
gctatttatagttggcaggaatcggaagattggacggaacaagaaaaattttatatggaa
caagagcttttagggataggtgtcagcaaacatccactacaagctattgcaagtaaggct
atttacccgattaccccaatcggaaatttgtcagaaaatagctatgctattatcttggtt
gaagttcagaaaataaaagtgattcgtaccaaaaagggtgaaaatatggccttcttacag
gcagatgatagtaagaaaaaattggatgtcactctcttttcagacttatatcgtcaggtt
ggacaggaaataaaagagggagccttctactatgtaaaaggaaaaatacaatcacgtgat
ggccgtctgcaaatgattgcacaagaaataagagaagcagttgctgaacgcttttggata
caggtgaaaaatcatgaatcggatcaagaaatttcacgcattttagaacaatttaaaggc
ccaatcccagtcatcatccggtatgaagaggaacagaaaaccatcgtttctccccatcat
tttgtagctaaatccaatgaattagaggagaaattgaatgaaatcgttatgaaaacgatt
tatcgctaa

All links

Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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